Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNA5SP240-201ENST00000365355 128 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 Y_RNA.359-201ENST00000365498 102 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 RNU6-1119P-201ENST00000384349 108 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 RNU1-57P-201ENST00000384491 166 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 DEFB108C-201ENST00000400154 252 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AL138885.1-201ENST00000405921 675 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AC007064.1-201ENST00000412238 351 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.56□□□□□ -2
VPS33AQ96AX1 UBE2V1P10-201ENST00000414685 269 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AC138623.1-201ENST00000418060 216 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 SUMO1P4-201ENST00000429430 302 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 HMGB1P31-201ENST00000437242 427 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AL118520.1-201ENST00000450770 291 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 CACYBPP2-201ENST00000453625 678 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 CYP2C59P-201ENST00000457790 269 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.56□□□□□ -2
VPS33AQ96AX1 SRIP1-201ENST00000489235 288 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.56□□□□□ -2
VPS33AQ96AX1 AC092436.1-201ENST00000506450 503 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.56□□□□□ -2
VPS33AQ96AX1 SNORA31.23-201ENST00000517219 133 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS33AQ96AX1 AGGF1P4-201ENST00000568249 801 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AP005136.1-201ENST00000579765 429 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 MIR4635-201ENST00000583759 79 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 MIR3611-201ENST00000584484 83 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AC073410.2-201ENST00000603240 332 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AL138963.2-201ENST00000605137 226 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AC104237.2-201ENST00000612456 443 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AC009233.1-201ENST00000616477 371 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 AL031601.2-202ENST00000622650 282 ntBASIC2.56□□□□□ -2
VPS33AQ96AX1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
VPS33AQ96AX1 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 Y_RNA.296-201ENST00000364930 108 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 RNU1-52P-201ENST00000384190 164 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 RNU6-434P-201ENST00000384376 107 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 RNA5SP171-201ENST00000391071 115 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 UBA52P6-201ENST00000399822 382 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 RPS4XP8-201ENST00000402039 771 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 RNA5SP390-201ENST00000410191 113 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 AC074117.2-201ENST00000417130 397 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.55□□□□□ -2
VPS33AQ96AX1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.55□□□□□ -2
VPS33AQ96AX1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.55□□□□□ -2
VPS33AQ96AX1 CR769767.1-201ENST00000436337 346 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 RPL7P49-201ENST00000471402 708 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 AP001025.1-201ENST00000486139 332 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.55□□□□□ -2
VPS33AQ96AX1 AC108078.1-201ENST00000508073 725 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.55□□□□□ -2
VPS33AQ96AX1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.55□□□□□ -2
VPS33AQ96AX1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.55□□□□□ -2
VPS33AQ96AX1 RNA5SP341-201ENST00000516261 117 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 RN7SKP219-201ENST00000516825 296 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 AP005435.4-201ENST00000529514 284 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.55□□□□□ -2
VPS33AQ96AX1 BNIP3P6-201ENST00000549284 499 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 SRGNP1-201ENST00000603392 451 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 MIR8057-201ENST00000620957 69 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 AC022418.1-201ENST00000624118 445 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 Z69720.2-201ENST00000624755 279 ntBASIC2.55□□□□□ -2
VPS33AQ96AX1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.55□□□□□ -2
VPS33AQ96AX1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.55□□□□□ -2
VPS33AQ96AX1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.54□□□□□ -2
VPS33AQ96AX1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.54□□□□□ -2
VPS33AQ96AX1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.54□□□□□ -2
VPS33AQ96AX1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.54□□□□□ -2
VPS33AQ96AX1 RNU6-78P-201ENST00000362897 107 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 RNU1-112P-201ENST00000364401 164 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 RNU5E-7P-201ENST00000365290 117 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 RNU6-1042P-201ENST00000384204 107 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 RNU6-517P-201ENST00000384362 110 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 Y_RNA.480-201ENST00000384364 102 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 RNU6-393P-201ENST00000384475 107 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.54□□□□□ -2
VPS33AQ96AX1 RPL35AP12-201ENST00000425362 338 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 AC002486.1-201ENST00000435098 391 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.54□□□□□ -2
VPS33AQ96AX1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.54□□□□□ -2
VPS33AQ96AX1 MTCO2P18-201ENST00000457151 658 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 TPT1P7-201ENST00000458300 517 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 MTCO3P9-201ENST00000506989 781 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 RPL37P25-201ENST00000507308 276 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 MTCYBP40-201ENST00000509390 1135 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.54□□□□□ -2
VPS33AQ96AX1 RN7SKP57-201ENST00000517248 293 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 AC105137.2-201ENST00000569073 466 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.54□□□□□ -2
VPS33AQ96AX1 AC090897.2-201ENST00000581715 130 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 MIR3941-201ENST00000582572 103 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 AL391646.1-201ENST00000603860 190 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.54□□□□□ -2
VPS33AQ96AX1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.54□□□□□ -2
VPS33AQ96AX1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms