Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC023141.12-201ENST00000512399 199 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 AC144568.1-201ENST00000520139 137 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.2□□□□□ -1.74
BRF1Q92994 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.2□□□□□ -1.74
BRF1Q92994 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.2□□□□□ -1.74
BRF1Q92994 VN1R91P-201ENST00000594377 169 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 AL158827.2-201ENST00000602494 330 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 U2.1-201ENST00000618978 145 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 AL691447.3-201ENST00000635020 330 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BRF1Q92994 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BRF1Q92994 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRF1Q92994 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRF1Q92994 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
BRF1Q92994 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRF1Q92994 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRF1Q92994 RNU6-595P-201ENST00000363944 107 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 RNU6-166P-201ENST00000384371 107 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 Y_RNA.526-201ENST00000384572 110 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 Y_RNA.533-201ENST00000384596 114 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 MIR10A-201ENST00000385043 110 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 RPL21P17-201ENST00000397467 475 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 RPL21P1-201ENST00000399532 476 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 U3.42-201ENST00000408746 214 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF1Q92994 AC017079.2-201ENST00000416102 485 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.19□□□□□ -1.74
BRF1Q92994 PGBD4P6-201ENST00000421501 610 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.19□□□□□ -1.74
BRF1Q92994 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF1Q92994 AP000873.1-201ENST00000463987 400 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 KC877373.1-201ENST00000479066 408 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 AC005921.1-201ENST00000510589 286 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 SNORA31.19-201ENST00000517079 126 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 AP005902.1-201ENST00000521358 186 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BRF1Q92994 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.19□□□□□ -1.74
BRF1Q92994 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BRF1Q92994 AC008121.1-201ENST00000603244 268 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 AC006023.2-201ENST00000609916 167 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 AC062037.2-201ENST00000610137 73 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 AL161629.2-201ENST00000615347 275 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 MIR8062-201ENST00000621515 85 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRF1Q92994 AC007785.2-201ENST00000598627 1916 ntBASIC4.19□□□□□ -1.74
BRF1Q92994 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRF1Q92994 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.18□□□□□ -1.74
BRF1Q92994 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.18□□□□□ -1.74
BRF1Q92994 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.18□□□□□ -1.74
BRF1Q92994 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRF1Q92994 AC068647.1-201ENST00000489539 2265 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 RNU6-874P-201ENST00000362390 105 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 MIR34A-201ENST00000385130 110 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 RN7SKP53-201ENST00000411337 315 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 RPL21P66-201ENST00000426566 466 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 TOMM20P4-201ENST00000427861 435 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 AL159987.2-201ENST00000432754 307 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 PIGFP3-201ENST00000441918 722 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF1Q92994 HIGD1AP2-201ENST00000446367 280 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.18□□□□□ -1.74
BRF1Q92994 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF1Q92994 RNU6-911P-201ENST00000516523 104 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 RNA5SP165-201ENST00000517142 115 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF1Q92994 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF1Q92994 AC004584.2-201ENST00000570407 410 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF1Q92994 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.18□□□□□ -1.74
BRF1Q92994 AC136601.2-201ENST00000604356 474 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.18□□□□□ -1.74
BRF1Q92994 U4.6-201ENST00000621618 127 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.18□□□□□ -1.74
BRF1Q92994 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
BRF1Q92994 HSPA8P1-201ENST00000425843 1833 ntBASIC4.18□□□□□ -1.74
BRF1Q92994 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.18□□□□□ -1.74
BRF1Q92994 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BRF1Q92994 MTND5P9-201ENST00000503854 1755 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 AC118273.1-201ENST00000525324 3006 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.17□□□□□ -1.74
BRF1Q92994 OTUD4P1-201ENST00000237841 3067 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 RNU6-784P-201ENST00000384330 106 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 Y_RNA.551-201ENST00000384661 102 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 Z98941.1-201ENST00000407764 100 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 RNU2-68P-201ENST00000410878 191 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF1Q92994 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.17□□□□□ -1.74
BRF1Q92994 Z82210.1-201ENST00000440037 231 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 RPL21P2-201ENST00000440049 481 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF1Q92994 DYNLT3P2-201ENST00000442517 295 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 AC092798.1-201ENST00000458542 409 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 AC139453.3-201ENST00000493276 369 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF1Q92994 RNU6-408P-201ENST00000515910 100 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 RNY3P15-201ENST00000516297 97 ntBASIC4.17□□□□□ -1.74
BRF1Q92994 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BRF1Q92994 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.17□□□□□ -1.74
BRF1Q92994 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms