Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX1Q92499 UBE2D3P2-201ENST00000424409 445 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 SNRPEP9-201ENST00000436794 238 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 RPL9P32-201ENST00000464118 620 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 BTF3L4P4-201ENST00000506381 449 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.14□□□□□ -1.75
DDX1Q92499 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX1Q92499 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.14□□□□□ -1.75
DDX1Q92499 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX1Q92499 CASP1P1-201ENST00000526345 212 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 AC040926.1-201ENST00000530195 238 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 TRAV37-201ENST00000553906 342 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX1Q92499 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.14□□□□□ -1.75
DDX1Q92499 AC025946.2-201ENST00000603398 234 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 MTND4LP5-201ENST00000605152 292 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 AC002044.1-201ENST00000606707 158 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 AC004825.2-201ENST00000616634 455 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 AC103858.2-201ENST00000621471 543 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 AC091903.1-201ENST00000624322 454 ntBASIC4.14□□□□□ -1.75
DDX1Q92499 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
DDX1Q92499 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX1Q92499 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX1Q92499 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX1Q92499 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX1Q92499 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX1Q92499 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
DDX1Q92499 AC008669.1-201ENST00000565823 2178 ntBASIC4.13□□□□□ -1.75
DDX1Q92499 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
DDX1Q92499 RNA5SP124-201ENST00000362739 110 ntBASIC4.13□□□□□ -1.75
DDX1Q92499 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
DDX1Q92499 Y_RNA.478-201ENST00000384358 107 ntBASIC4.13□□□□□ -1.75
DDX1Q92499 SNORA19-201ENST00000384737 128 ntBASIC4.13□□□□□ -1.75
DDX1Q92499 MIR3074-201ENST00000384885 81 ntBASIC4.13□□□□□ -1.75
DDX1Q92499 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX1Q92499 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX1Q92499 RPL39P38-201ENST00000467018 153 ntBASIC4.13□□□□□ -1.75
DDX1Q92499 RNU6-111P-201ENST00000517179 105 ntBASIC4.13□□□□□ -1.75
DDX1Q92499 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.13□□□□□ -1.75
DDX1Q92499 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX1Q92499 FTX_2.1-201ENST00000618816 94 ntBASIC4.13□□□□□ -1.75
DDX1Q92499 AC027309.3-201ENST00000623419 351 ntBASIC4.13□□□□□ -1.75
DDX1Q92499 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX1Q92499 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX1Q92499 AL034408.1-202ENST00000636088 415 ntBASIC4.13□□□□□ -1.75
DDX1Q92499 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
DDX1Q92499 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX1Q92499 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX1Q92499 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
DDX1Q92499 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
DDX1Q92499 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
DDX1Q92499 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
DDX1Q92499 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.13□□□□□ -1.75
DDX1Q92499 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
DDX1Q92499 LINC02471-203ENST00000641941 4752 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX1Q92499 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
DDX1Q92499 Y_RNA.64-201ENST00000362845 102 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 RNU4-42P-201ENST00000364738 142 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 RNU6-1303P-201ENST00000364841 107 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 Y_RNA.477-201ENST00000384352 108 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 Y_RNA.551-201ENST00000384661 102 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
DDX1Q92499 AC097713.2-201ENST00000430199 356 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX1Q92499 AC084198.1-201ENST00000477747 402 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX1Q92499 RPL21P13-201ENST00000488305 481 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 AC105758.1-201ENST00000506038 399 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 SNORA25.11-201ENST00000515935 105 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 Y_RNA.673-201ENST00000516306 88 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 MIR892C-201ENST00000516410 77 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 Y_RNA.700-201ENST00000516806 100 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 AC025755.1-201ENST00000521306 278 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX1Q92499 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX1Q92499 CYCSP30-201ENST00000546447 172 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX1Q92499 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX1Q92499 LRRC37A5P-203ENST00000580181 585 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 RAC1P9-201ENST00000604990 392 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX1Q92499 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX1Q92499 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
DDX1Q92499 AC118273.1-201ENST00000525324 3006 ntBASIC4.12□□□□□ -1.75
DDX1Q92499 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DDX1Q92499 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DDX1Q92499 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
DDX1Q92499 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
DDX1Q92499 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.11□□□□□ -1.75
DDX1Q92499 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.11□□□□□ -1.75
DDX1Q92499 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DDX1Q92499 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
DDX1Q92499 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
DDX1Q92499 OR56A5-201ENST00000340110 738 ntBASIC4.11□□□□□ -1.75
DDX1Q92499 RNU6-596P-201ENST00000365395 98 ntBASIC4.11□□□□□ -1.75
DDX1Q92499 RNU6-213P-201ENST00000384051 104 ntBASIC4.11□□□□□ -1.75
DDX1Q92499 RNU6-214P-201ENST00000384130 107 ntBASIC4.11□□□□□ -1.75
DDX1Q92499 Y_RNA.577-201ENST00000384794 101 ntBASIC4.11□□□□□ -1.75
DDX1Q92499 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms