Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC131280.1-202ENST00000624067 4211 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 RNU6-553P-201ENST00000364047 96 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 RNU6-217P-201ENST00000384164 104 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 USP9YP13-201ENST00000417797 480 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AC099548.1-201ENST00000421443 426 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AL033528.1-201ENST00000453780 140 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AC138853.1-201ENST00000503549 823 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 SCARNA15.2-201ENST00000516409 127 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 RNU6-201P-201ENST00000517100 61 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 MTCO2P4-201ENST00000517968 247 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AC084851.1-201ENST00000529105 249 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AC007375.1-201ENST00000554513 578 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 ZNF519P3-201ENST00000557158 1032 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AL391261.3-201ENST00000557194 520 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AC137800.2-201ENST00000574375 120 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AL358072.1-201ENST00000604156 575 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AC092354.1-201ENST00000606057 376 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 SDR42E1P2-201ENST00000614861 481 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 AC110079.1-202ENST00000635213 138 ntBASIC1.65□□□□□ -2.14
SHROOM3Q8TF72 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 RNU4-13P-201ENST00000364019 141 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 RNA5SP139-201ENST00000364340 117 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 SMIM11P1-201ENST00000369586 178 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 RNU6-946P-201ENST00000383878 107 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 SNORA40.3-201ENST00000390964 122 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AL390237.1-201ENST00000404226 1415 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AL359634.1-202ENST00000404721 284 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 CCNG1P1-201ENST00000406783 885 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 RNU2-25P-201ENST00000411041 191 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC090774.1-201ENST00000435925 246 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 Z83846.1-201ENST00000446798 265 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 MTND1P27-201ENST00000451117 902 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AL359385.1-201ENST00000456509 365 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC005178.1-201ENST00000508392 440 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 MTND1P22-201ENST00000510572 951 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC022447.1-201ENST00000515358 464 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 RNU6-390P-201ENST00000516259 103 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 DUXAP5-201ENST00000529668 529 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC068135.2-201ENST00000569293 1028 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC090897.2-201ENST00000581715 130 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC098848.2-201ENST00000588023 330 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC110760.3-201ENST00000598794 467 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 RMST_6.1-201ENST00000611980 203 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AL158063.1-201ENST00000615349 536 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC245884.12-201ENST00000615364 59 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AC090132.2-201ENST00000615881 347 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 AL603839.4-201ENST00000624658 1005 ntBASIC1.65□□□□□ -2.15
SHROOM3Q8TF72 Y_RNA.159-201ENST00000363674 87 ntBASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 RNU5E-6P-201ENST00000365574 115 ntBASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 RNU2-40P-201ENST00000410833 196 ntBASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 AL365203.2-201ENST00000423444 196 ntBASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 BX510359.4-201ENST00000423750 193 ntBASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 AC137499.1-201ENST00000427602 88 ntBASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 SNRPGP6-201ENST00000451124 220 ntBASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 MTCO3P28-201ENST00000513351 515 ntBASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 RNU7-51P-201ENST00000516560 62 ntBASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 AC097468.3-201ENST00000607956 456 ntBASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SHROOM3Q8TF72 Y_RNA.51-201ENST00000362725 102 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 U8.3-201ENST00000363321 132 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 RNU5E-5P-201ENST00000365379 116 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 Z98749.2-208ENST00000381646 500 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 CD24P4-201ENST00000382840 243 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 RNY3P10-201ENST00000384764 102 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 MRPL42P2-201ENST00000403169 426 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC092573.2-201ENST00000434546 243 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 MTCYBP1-201ENST00000454315 1119 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 snoU109.1-201ENST00000459339 135 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 LARP1BP2-201ENST00000486594 519 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC010587.1-201ENST00000505809 469 ntBASIC1.63□□□□□ -2.15
SHROOM3Q8TF72 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms