Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 ATP5A1P2-202ENST00000616464 443 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 MIR7975-201ENST00000619350 68 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AC034229.5-201ENST00000624258 185 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 MIR7157-201ENST00000635801 60 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 MTND5P30-201ENST00000452896 1731 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 RNU6-259P-201ENST00000383999 107 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 RNU6-220P-201ENST00000390919 107 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 PTMAP2-201ENST00000397627 327 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 AL138885.1-201ENST00000405921 675 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 RNU2-29P-201ENST00000410423 189 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 RNU4-55P-201ENST00000410731 137 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 CYCSP33-201ENST00000414485 327 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 Z98742.2-201ENST00000431564 187 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 FABP5P14-201ENST00000437273 393 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 CALM1P1-201ENST00000442082 433 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 RPL7P43-201ENST00000478876 753 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 RPS3AP14-201ENST00000483907 780 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 MTAPP1-201ENST00000489154 819 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 AC090096.1-201ENST00000489168 390 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 AC002456.2-201ENST00000509356 380 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 SAP18P1-201ENST00000512058 390 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 Y_RNA.687-201ENST00000516558 91 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 SNORA31.18-201ENST00000517043 134 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 SCARNA3-201ENST00000517097 143 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 AP003392.2-201ENST00000527269 208 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 AGGF1P4-201ENST00000568249 801 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 MTATP6P3-201ENST00000581686 676 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 MIR3199-1-201ENST00000582434 88 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 AC103591.3-201ENST00000608684 209 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 AC007684.1-201ENST00000609671 477 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 SCARNA4-202ENST00000625402 129 ntBASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC197Q8NCU1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 OR4G2P-201ENST00000328113 903 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 RNU6-1127P-201ENST00000384580 107 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 RNU6-1158P-201ENST00000391167 107 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 RNU6-903P-201ENST00000391270 109 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 BTF3P7-201ENST00000407097 488 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 PGBD4P6-201ENST00000421501 610 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 RPL30P4-201ENST00000429309 333 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AL441985.1-201ENST00000457727 251 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 RNU7-63P-201ENST00000459054 62 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 MED28P2-201ENST00000475771 317 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 RNU5B-3P-201ENST00000516601 115 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 RNU6-1178P-201ENST00000516674 107 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AC106785.1-201ENST00000565935 262 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 MIR4765-201ENST00000585007 77 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 MTND4P27-201ENST00000450813 1354 ntBASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC197Q8NCU1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 RNU6-552P-201ENST00000362869 119 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 RNA5SP267-201ENST00000364893 126 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 RNU4-52P-201ENST00000384209 138 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 RNU6-517P-201ENST00000384362 110 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 UBA52P6-201ENST00000399822 382 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AL591416.1-201ENST00000404015 867 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 COTL1P1-201ENST00000422309 375 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 NUP35P1-201ENST00000422734 947 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 RNU6-717P-201ENST00000459076 104 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 RN7SL542P-201ENST00000467147 294 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AC018437.1-201ENST00000492214 406 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AC023141.11-201ENST00000508864 202 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AC096725.1-201ENST00000514266 313 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms