Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.53□□□□□ -2
CCDC63Q8NA47 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.53□□□□□ -2
CCDC63Q8NA47 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.53□□□□□ -2
CCDC63Q8NA47 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.53□□□□□ -2
CCDC63Q8NA47 MIR4429-201ENST00000580105 73 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.53□□□□□ -2
CCDC63Q8NA47 MIR4658-201ENST00000584344 65 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 AC087045.1-201ENST00000605856 382 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 MIR6798-201ENST00000612887 67 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 AC015540.1-201ENST00000615828 501 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 MIR8057-201ENST00000620957 69 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 AC139792.3-201ENST00000623525 224 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 AC068137.4-201ENST00000638485 296 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 AC006020.1-201ENST00000420179 1854 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2
CCDC63Q8NA47 AL354685.2-201ENST00000448218 1447 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC63Q8NA47 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CCDC63Q8NA47 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC63Q8NA47 SNORA9-201ENST00000384215 133 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 RNU6-45P-201ENST00000384471 107 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 RNU6-1127P-201ENST00000384580 107 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 MIR10A-201ENST00000385043 110 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 U3.26-201ENST00000391236 204 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 MTCO3P40-201ENST00000392516 676 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 BTF3P7-201ENST00000407097 488 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 RNU2-29P-201ENST00000410423 189 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 RNU6-607P-201ENST00000411283 108 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 CYCSP33-201ENST00000414485 327 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AL606489.2-201ENST00000433886 234 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 snoU13.22-201ENST00000459428 104 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AL672167.3-201ENST00000465951 960 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AC091435.1-201ENST00000505442 584 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 Y_RNA.655-201ENST00000515919 96 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 SNORA40.12-201ENST00000516329 111 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 RNU6-1178P-201ENST00000516674 107 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 SNORA31.18-201ENST00000517043 134 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 ACA59.2-201ENST00000517061 156 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AC104383.1-201ENST00000530297 370 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC63Q8NA47 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC63Q8NA47 LRRC37A5P-203ENST00000580181 585 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 MIR5583-1-201ENST00000580941 59 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AC004223.2-201ENST00000590309 544 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AC012507.3-201ENST00000603556 477 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AC092954.2-201ENST00000609103 430 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC63Q8NA47 HULC.1-201ENST00000612720 240 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 RMST_4.1-201ENST00000616886 107 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 U6.42-201ENST00000618440 107 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 AL359880.1-201ENST00000621879 266 ntBASIC2.52□□□□□ -2.01
CCDC63Q8NA47 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC63Q8NA47 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CCDC63Q8NA47 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AC004520.1-201ENST00000608362 1413 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 RNU6-942P-201ENST00000363002 107 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 RNU6-1303P-201ENST00000364841 107 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 RNU6-1280P-201ENST00000365211 107 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 RNU6-996P-201ENST00000365438 107 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 RNU6-1083P-201ENST00000384022 107 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 RNU6-72P-201ENST00000384285 79 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 USP9YP27-201ENST00000418455 438 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 PTGES3P4-201ENST00000426243 356 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 MICF-203ENST00000432679 129 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AL121769.1-201ENST00000469473 401 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AC002456.2-201ENST00000509356 380 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AC104136.1-201ENST00000512969 394 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AP001893.2-201ENST00000526949 202 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AC245505.1-201ENST00000556398 224 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 MIR5692A1-201ENST00000580523 69 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 MIR3944-201ENST00000581277 108 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AL354950.2-201ENST00000617939 290 ntBASIC2.51□□□□□ -2.01
CCDC63Q8NA47 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC63Q8NA47 AC004944.1-201ENST00000517807 3059 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 RNU6-517P-201ENST00000384362 110 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 RNU6-19P-201ENST00000384718 107 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 SNORA16.2-201ENST00000390991 127 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 RNU6-780P-201ENST00000391030 104 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 FTH1P15-201ENST00000406984 280 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms