Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL159153.1-201ENST00000619688 317 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 AC097372.5-201ENST00000623665 376 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 U4.7-201ENST00000638126 106 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 MAPK10-373ENST00000641983 6772 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.19-201ENST00000362462 99 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.288-201ENST00000364854 92 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.376-201ENST00000365638 108 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 AL359837.1-201ENST00000381357 287 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.483-201ENST00000384380 101 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 MIR607-201ENST00000385241 96 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 MIR1302-6-201ENST00000408466 90 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 SNORA3.3-201ENST00000408712 125 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.592-201ENST00000410274 109 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 RN7SKP156-201ENST00000410308 342 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 RN7SKP177-201ENST00000410567 355 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 RNA5SP31-201ENST00000411144 127 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 AC092047.1-201ENST00000424997 240 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 AC007389.2-201ENST00000434630 306 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 AC034236.1-201ENST00000469891 373 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 UBE2CP3-201ENST00000502715 450 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 AC107222.1-201ENST00000510899 637 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-408P-201ENST00000515910 100 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-1143P-201ENST00000516125 104 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-897P-201ENST00000517135 105 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 RN7SKP289-201ENST00000517244 295 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 CASP1P1-201ENST00000526345 212 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 AL590705.4-201ENST00000532209 134 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 CYCSP39-201ENST00000565821 309 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 MIR4782-201ENST00000577987 79 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 AC093908.1-201ENST00000623125 8092 ntBASIC3.8□□□□□ -1.8
TRIM48Q8IWZ4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-227P-201ENST00000362865 103 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-770P-201ENST00000363929 105 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 RNU4-50P-201ENST00000364361 141 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 Z98749.2-208ENST00000381646 500 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.405-201ENST00000383979 100 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.451-201ENST00000384200 100 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.471-201ENST00000384312 102 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.524-201ENST00000384564 100 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-658P-201ENST00000384606 106 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.561-201ENST00000384694 100 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 SNORA11-201ENST00000408789 128 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 RPS6P12-201ENST00000432491 726 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 AL356535.1-201ENST00000440335 398 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 RN7SL542P-201ENST00000467147 294 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 AC020593.1-201ENST00000507399 299 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.680-201ENST00000516441 93 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 SNORA40.15-201ENST00000516884 107 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 YPEL5P3-201ENST00000547227 352 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 H3F3AP1-201ENST00000559984 334 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 AL390123.1-201ENST00000603216 237 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 AC078938.1-201ENST00000620993 318 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 AP000560.1-201ENST00000624150 1937 ntBASIC3.79□□□□□ -1.8
TRIM48Q8IWZ4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.358-201ENST00000365491 99 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-898P-201ENST00000365627 104 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.526-201ENST00000384572 110 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 RNA5SP129-201ENST00000410276 118 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-847P-201ENST00000411115 108 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 MTCO3P19-201ENST00000415864 321 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 SNORA84-201ENST00000459229 133 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 RNU7-87P-201ENST00000459343 62 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 AC005921.1-201ENST00000510589 286 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 RNU1-103P-201ENST00000516502 125 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 SNORA31.18-201ENST00000517043 134 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-570P-201ENST00000517051 105 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 AC022695.1-201ENST00000522089 237 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms