Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ELOCP29-201ENST00000588193 334 ntBASIC1.87□□□□□ -2.11
ZNF546Q86UE3 U6.42-201ENST00000618440 107 ntBASIC1.87□□□□□ -2.11
ZNF546Q86UE3 SCARNA4-202ENST00000625402 129 ntBASIC1.87□□□□□ -2.11
ZNF546Q86UE3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.87□□□□□ -2.11
ZNF546Q86UE3 MIR1291-201ENST00000627649 87 ntBASIC1.87□□□□□ -2.11
ZNF546Q86UE3 MIR3529-201ENST00000637713 78 ntBASIC1.87□□□□□ -2.11
ZNF546Q86UE3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.87□□□□□ -2.11
ZNF546Q86UE3 CENPCP1-201ENST00000533085 2578 ntBASIC1.87□□□□□ -2.11
ZNF546Q86UE3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
ZNF546Q86UE3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
ZNF546Q86UE3 RNU6-843P-201ENST00000384454 104 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 Y_RNA.576-201ENST00000384781 102 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.86□□□□□ -2.11
ZNF546Q86UE3 RPS4XP8-201ENST00000402039 771 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 RNA5SP338-201ENST00000410495 85 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 RNU2-63P-201ENST00000410792 194 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 RNA5SP111-201ENST00000411386 101 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AIMP1P2-201ENST00000425294 312 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 CALM2P2-201ENST00000428512 440 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.86□□□□□ -2.11
ZNF546Q86UE3 ARL5AP4-201ENST00000430731 512 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 RPL31P35-201ENST00000431058 377 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 GPR143P-201ENST00000434155 205 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 RPS15AP28-201ENST00000435088 386 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC079781.2-201ENST00000446424 169 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 RPL23AP7-203ENST00000449021 469 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AL021397.1-201ENST00000451806 248 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 SNORD109B-201ENST00000458961 67 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 SNORD109A-201ENST00000459128 67 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 snoU109.2-201ENST00000459316 135 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC140059.1-201ENST00000489238 361 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC026436.1-201ENST00000510537 270 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.86□□□□□ -2.11
ZNF546Q86UE3 Y_RNA.687-201ENST00000516558 91 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 SNORA18.6-201ENST00000516792 115 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC027176.1-201ENST00000560204 514 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC002984.1-201ENST00000591692 448 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 BNIP3P22-201ENST00000593399 556 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AL109918.3-201ENST00000603072 338 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AL713866.2-201ENST00000603579 219 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 APOOP1-201ENST00000604695 592 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC064872.1-201ENST00000604823 1072 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC021646.1-201ENST00000605469 484 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC096772.1-201ENST00000609146 564 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC093788.1-201ENST00000609356 927 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AL627230.6-201ENST00000611129 280 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 MIR6766-201ENST00000622641 72 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 AC091932.3-201ENST00000624223 323 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.86□□□□□ -2.11
ZNF546Q86UE3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.86□□□□□ -2.11
ZNF546Q86UE3 HAUS6P2-201ENST00000433254 2404 ntBASIC1.86□□□□□ -2.11
ZNF546Q86UE3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AL365361.1-201ENST00000566942 3481 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AC008555.8-201ENST00000623602 2168 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 MTND5P17-201ENST00000418405 1603 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AC016717.2-201ENST00000609089 5141 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 RNU1-91P-201ENST00000364746 163 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 SNORD115-7-201ENST00000365306 82 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 RNU6-487P-201ENST00000365430 104 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AL359511.1-201ENST00000402970 211 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 RNU6-1140P-201ENST00000410517 106 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AC000111.3-201ENST00000433478 193 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AC107032.1-201ENST00000485945 480 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AC114781.4-201ENST00000513707 639 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 RNU1-86P-201ENST00000516108 154 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 SNORD27.1-201ENST00000516319 72 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 RNA5SP24-201ENST00000516478 95 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 RNU1-107P-201ENST00000516617 154 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 MIR4448-201ENST00000584360 86 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AC098848.2-201ENST00000588023 330 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 CLIC4P2-201ENST00000601934 717 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AL670379.4-201ENST00000605279 254 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 RMST_4.1-201ENST00000616886 107 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 MIR5739-201ENST00000619803 80 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 AC098657.3-201ENST00000620434 263 ntBASIC1.85□□□□□ -2.11
ZNF546Q86UE3 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.85□□□□□ -2.11
ZNF546Q86UE3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms