Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-199P-201ENST00000362954 107 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 Y_RNA.172-201ENST00000363765 102 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 RNU1-32P-201ENST00000363937 159 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-356P-201ENST00000384140 107 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-376P-201ENST00000384731 106 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 RN7SKP267-201ENST00000410381 285 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-1245P-201ENST00000411130 106 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 AC006026.2-201ENST00000457376 180 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 UBE2CP3-201ENST00000502715 450 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 RN7SKP164-201ENST00000516138 266 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 CYCSP26-201ENST00000534107 320 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 AC018448.1-201ENST00000552843 316 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 MIR5571-201ENST00000577998 113 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 A2MP1-204ENST00000566278 4130 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 DHX9P1-201ENST00000436565 3076 ntBASIC4.69□□□□□ -1.66
LYSMD3Q7Z3D4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-1064P-201ENST00000410626 104 ntBASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 U8.19-201ENST00000459095 133 ntBASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 AL132838.2-201ENST00000492041 314 ntBASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 RPL36AP41-201ENST00000493820 306 ntBASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 RNA5SP360-201ENST00000516555 118 ntBASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 CYCSP39-201ENST00000565821 309 ntBASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 AC009127.3-201ENST00000570531 403 ntBASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 MIR4679-2-201ENST00000578358 77 ntBASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 MIR378J-201ENST00000611988 109 ntBASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 AC090132.2-201ENST00000615881 347 ntBASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 AC024581.2-201ENST00000619986 252 ntBASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 AL672167.1-203ENST00000641299 2975 ntBASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LYSMD3Q7Z3D4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-942P-201ENST00000363002 107 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 Y_RNA.498-201ENST00000384460 102 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-763P-201ENST00000390865 106 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AL356867.1-201ENST00000429623 299 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AC068287.1-201ENST00000430283 295 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 EEF1B2P7-201ENST00000451177 676 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 RNU7-197P-201ENST00000458836 62 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 RPL7AP28-201ENST00000464513 571 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AC021269.2-201ENST00000532318 330 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AC127455.1-201ENST00000565496 145 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 MIR3921-201ENST00000577308 85 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 MIR3613-201ENST00000579844 87 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 MIR4697-201ENST00000582977 78 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AL356157.2-201ENST00000605122 111 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AC069294.1-201ENST00000608397 350 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AC011603.4-201ENST00000611325 277 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AC005520.5-201ENST00000613926 164 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AL034408.1-202ENST00000636088 415 ntBASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms