Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.1□□□□□ -2.07
NIPAL3Q6P499 Y_RNA.687-201ENST00000516558 91 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 RNU7-193P-201ENST00000516723 65 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 RNU6-410P-201ENST00000517006 107 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.1□□□□□ -2.07
NIPAL3Q6P499 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.1□□□□□ -2.07
NIPAL3Q6P499 CYCSP26-201ENST00000534107 320 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 AC105137.2-201ENST00000569073 466 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.1□□□□□ -2.07
NIPAL3Q6P499 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
NIPAL3Q6P499 RPL30P11-203ENST00000598995 310 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 AL713866.2-201ENST00000603579 219 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 AC103810.6-201ENST00000606708 136 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.1□□□□□ -2.07
NIPAL3Q6P499 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.1□□□□□ -2.07
NIPAL3Q6P499 AL359740.1-201ENST00000624340 592 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 AL160394.1-201ENST00000624765 724 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 MIR203B-201ENST00000636080 86 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 IGHVIII-44-202ENST00000636235 289 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 U6.114-201ENST00000636407 96 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.1□□□□□ -2.07
NIPAL3Q6P499 FARSBP1-201ENST00000435808 1778 ntBASIC2.1□□□□□ -2.07
NIPAL3Q6P499 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
NIPAL3Q6P499 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NIPAL3Q6P499 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.1□□□□□ -2.07
NIPAL3Q6P499 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NIPAL3Q6P499 ZNF720P1-201ENST00000562403 1939 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 RNU6-1010P-201ENST00000362757 107 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 RNU4-21P-201ENST00000362802 126 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 Y_RNA.169-201ENST00000363745 96 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 RNU6-487P-201ENST00000365430 104 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 SNORD116-20-201ENST00000384529 92 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 MIR144-201ENST00000384886 86 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 SNORD23.1-201ENST00000408212 104 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 RNU6-1140P-201ENST00000410517 106 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 RNU6-195P-201ENST00000411352 109 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 EEF1A1P40-201ENST00000412883 573 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 PGBD4P6-201ENST00000421501 610 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 MTCYBP5-201ENST00000423752 1135 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AC079781.2-201ENST00000446424 169 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AL360271.2-201ENST00000447710 161 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 SNRPGP9-201ENST00000456025 225 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 UBE2DNL-203ENST00000474922 222 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AC090572.1-201ENST00000519251 160 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AC145350.1-201ENST00000567426 208 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 MYL12BP1-201ENST00000569826 507 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AC098848.2-201ENST00000588023 330 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AC025165.5-201ENST00000602802 578 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AC046143.2-201ENST00000609789 160 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 AC093648.1-201ENST00000623546 606 ntBASIC2.09□□□□□ -2.07
NIPAL3Q6P499 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NIPAL3Q6P499 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 RNU6-371P-201ENST00000364283 108 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 RNU6-384P-201ENST00000364900 104 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 RNY3P10-201ENST00000384764 102 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 Y_RNA.576-201ENST00000384781 102 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 MIR95-201ENST00000385072 81 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 MIR561-201ENST00000385216 97 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 SNORA26.8-201ENST00000391306 124 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.08□□□□□ -2.08
NIPAL3Q6P499 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AC009961.2-201ENST00000435771 251 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AL445567.1-201ENST00000439121 144 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AC104058.1-201ENST00000448028 297 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 GAPDHP17-201ENST00000449858 1001 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AC010486.2-201ENST00000505572 483 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AC104806.1-201ENST00000508720 308 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 SNORA48.11-201ENST00000517015 89 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 RNU6-685P-201ENST00000517088 95 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 OR5AL2P-201ENST00000532185 920 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AP000889.2-201ENST00000532684 490 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.08□□□□□ -2.08
NIPAL3Q6P499 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.08□□□□□ -2.08
NIPAL3Q6P499 NIFKP6-201ENST00000598115 845 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 AL121917.1-203ENST00000605534 577 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 MIR98-201ENST00000606724 119 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 MIR6895-201ENST00000613497 78 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 uc_338.15-201ENST00000615470 191 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
NIPAL3Q6P499 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.08□□□□□ -2.08
NIPAL3Q6P499 MTND5P17-201ENST00000418405 1603 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms