Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 GNRHR2P1-201ENST00000555315 631 ntBASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 SNORA62.6-201ENST00000606322 83 ntBASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 AC090132.2-201ENST00000615881 347 ntBASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 AC130454.1-201ENST00000622948 401 ntBASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 AC027309.3-201ENST00000623419 351 ntBASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USPL1Q5W0Q7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 RNA5SP50-201ENST00000363731 107 ntBASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 RNU6-611P-201ENST00000384276 104 ntBASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 RNU4-70P-201ENST00000384579 139 ntBASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 SNORA71B-202ENST00000439232 272 ntBASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 OR2AQ1P-201ENST00000451972 200 ntBASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 RN7SKP210-201ENST00000459176 261 ntBASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 RNU6-1023P-201ENST00000516137 106 ntBASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 Vault.1-201ENST00000516474 102 ntBASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 HSPE1P20-201ENST00000538133 289 ntBASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 AC009318.2-201ENST00000610917 651 ntBASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 AL591424.2-201ENST00000617023 128 ntBASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 MIR4727-201ENST00000622232 55 ntBASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.74□□□□□ -1.65
USPL1Q5W0Q7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 AC008568.2-201ENST00000623862 2313 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 Y_RNA.111-201ENST00000363248 100 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 RNY3P11-201ENST00000364153 102 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 Y_RNA.222-201ENST00000364264 102 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 Y_RNA.376-201ENST00000365638 108 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 Y_RNA.478-201ENST00000384358 107 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 Y_RNA.562-201ENST00000384695 113 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 MIR634-201ENST00000385208 97 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 Y_RNA.592-201ENST00000410274 109 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 AC139712.2-201ENST00000424302 339 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 ARL5AP4-201ENST00000430731 512 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 AK3P2-201ENST00000507976 429 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 RNU6-612P-201ENST00000516909 102 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 SNORA31.19-201ENST00000517079 126 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 AC107016.1-201ENST00000550463 337 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 AC090517.1-201ENST00000569307 266 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 AC006077.1-201ENST00000604746 343 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
USPL1Q5W0Q7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 Y_RNA.19-201ENST00000362462 99 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 SNORD9-201ENST00000362566 104 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 RNU1-76P-201ENST00000362903 159 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 Y_RNA.183-201ENST00000363882 113 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 SNORA7.2-201ENST00000364446 145 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 RNU6-166P-201ENST00000384371 107 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 MT-TW-201ENST00000387382 68 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 SNORA48.2-201ENST00000390926 124 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 AC007919.1-201ENST00000429380 217 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 CYCSP4-201ENST00000429682 331 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 AL078601.1-201ENST00000444542 271 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 ANP32BP2-201ENST00000454525 545 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 SNORD105B-201ENST00000458770 79 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 RNU6-897P-201ENST00000517135 105 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 AL590705.4-201ENST00000532209 134 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms