Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 MIR4765-201ENST00000585007 77 ntBASIC2.92□□□□□ -1.94
SNX30Q5VWJ9 RPL12P50-201ENST00000603116 116 ntBASIC2.92□□□□□ -1.94
SNX30Q5VWJ9 AL359880.1-201ENST00000621879 266 ntBASIC2.92□□□□□ -1.94
SNX30Q5VWJ9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SNX30Q5VWJ9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
SNX30Q5VWJ9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SNX30Q5VWJ9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SNX30Q5VWJ9 AC092593.1-201ENST00000515413 1815 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 AC006020.1-201ENST00000420179 1854 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 RPL9P7-201ENST00000330965 580 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 RNU6-858P-201ENST00000362436 107 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 Y_RNA.255-201ENST00000364581 97 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 RNU4-75P-201ENST00000364621 146 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 RNU1-109P-201ENST00000383960 147 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 RNU6-1158P-201ENST00000391167 107 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 RNU2-25P-201ENST00000411041 191 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 AC092427.1-202ENST00000430569 476 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 MICF-203ENST00000432679 129 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 FABP5P14-201ENST00000437273 393 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 RPL23AP70-201ENST00000483361 460 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 MRPL42P6-201ENST00000486397 371 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 MTND3P25-201ENST00000509243 135 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 RNA5SP112-201ENST00000515937 99 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 SNORA40.12-201ENST00000516329 111 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 HPRT1P3-201ENST00000539521 576 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 AL512310.1-201ENST00000548639 172 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 HIF1AP1-201ENST00000553642 175 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 AC073539.2-201ENST00000597113 165 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 AC006023.1-201ENST00000603944 259 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 Z82243.1-201ENST00000609432 473 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 AL449363.1-201ENST00000617815 186 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 AC026585.1-201ENST00000619582 524 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 CR381653.2-201ENST00000624041 768 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 AC022418.1-201ENST00000624118 445 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 MIR3529-201ENST00000637713 78 ntBASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SNX30Q5VWJ9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
SNX30Q5VWJ9 AL109809.4-201ENST00000603520 2185 ntBASIC2.9□□□□□ -1.94
SNX30Q5VWJ9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.9□□□□□ -1.94
SNX30Q5VWJ9 RNU6-461P-201ENST00000364195 107 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 RNU1-112P-201ENST00000364401 164 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 RNU6-384P-201ENST00000364900 104 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 SNORD116-4-201ENST00000384733 96 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AC068050.1-201ENST00000394891 380 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AL138827.1-201ENST00000402666 306 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 RNA5SP184-201ENST00000411071 108 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AL353193.1-201ENST00000421444 268 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 NUP35P1-201ENST00000422734 947 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AC063976.3-201ENST00000426849 329 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AL669831.1-202ENST00000428504 417 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AL606489.2-201ENST00000433886 234 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 GTF2IP13-201ENST00000438487 386 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AC073415.1-201ENST00000449240 153 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 SCARNA18-201ENST00000459004 134 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AC083798.1-201ENST00000472671 131 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 RNU5B-3P-201ENST00000516601 115 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 RNU6-826P-201ENST00000516827 104 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 BTF3P12-201ENST00000519620 469 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 RPL7P20-201ENST00000520308 745 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AC009163.5-201ENST00000575421 637 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AC096772.1-201ENST00000609146 564 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AL031601.2-202ENST00000622650 282 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AC099654.12-201ENST00000639868 649 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 HAUS6P2-201ENST00000433254 2404 ntBASIC2.9□□□□□ -1.95
SNX30Q5VWJ9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 MIR26A1-201ENST00000362205 77 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 RNU6-486P-201ENST00000363116 107 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 SET-203ENST00000372688 801 ntTSL 2 BASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 RNU6-1127P-201ENST00000384580 107 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 SNORD70.1-201ENST00000391007 85 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 FTH1P15-201ENST00000406984 280 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 MTCYBP8-201ENST00000422855 651 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 VN1R108P-201ENST00000431580 830 ntBASIC2.89□□□□□ -1.95
SNX30Q5VWJ9 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms