Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC008568.2-201ENST00000623862 2313 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 AC090740.1-201ENST00000623193 2262 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 RNA5SP307-201ENST00000362863 116 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 RNU6-682P-201ENST00000363843 106 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 RNU6-879P-201ENST00000364328 108 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 Y_RNA.286-201ENST00000364813 102 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 Y_RNA.506-201ENST00000384494 102 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 RNA5SP213-201ENST00000391031 106 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 COX6CP10-201ENST00000416832 224 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 AC005002.2-201ENST00000438228 269 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 Z82210.1-201ENST00000440037 231 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 NDUFB4P10-201ENST00000452541 359 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 AC011276.1-201ENST00000469688 323 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 RPL23AP49-201ENST00000492925 468 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 Y_RNA.683-201ENST00000516508 93 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 AC113403.1-201ENST00000604910 193 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 SNX18P1Y-201ENST00000616231 511 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 AL672296.1-201ENST00000427780 2158 ntBASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TTC39BQ5VTQ0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 SNORD115-32-201ENST00000364079 82 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 RNY4P28-201ENST00000365281 93 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 SNORD6-201ENST00000365444 73 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 RNU6-1286P-201ENST00000383871 107 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 Y_RNA.504-201ENST00000384481 104 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 U3.22-201ENST00000391120 215 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 RPS4XP3-201ENST00000398541 413 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 SNORA11F-201ENST00000408237 128 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 Y_RNA.626-201ENST00000411288 95 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 RPS29P17-201ENST00000430795 166 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 RPS15AP7-201ENST00000439294 405 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 AP000870.1-201ENST00000472927 406 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 AF186996.7-201ENST00000492781 209 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 SEPT14P8-201ENST00000508026 178 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 AC091874.1-201ENST00000511402 339 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 RNA5SP468-201ENST00000516782 93 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 RNU6-1183P-201ENST00000517054 60 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 AC090281.1-201ENST00000523019 276 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 MIR378J-201ENST00000611988 109 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 AC140479.6-201ENST00000633535 357 ntBASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
TTC39BQ5VTQ0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 RNU1-15P-201ENST00000353977 144 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 RNU6-740P-201ENST00000364734 105 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 RNU6-140P-201ENST00000384566 108 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 MIR325-201ENST00000385260 98 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 RNA5SP44-201ENST00000410446 133 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 RNU6-1140P-201ENST00000410517 106 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 AC092047.1-201ENST00000424997 240 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 AC243964.1-201ENST00000441814 261 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 RN7SL303P-201ENST00000469773 251 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 AC107016.1-201ENST00000550463 337 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 SNORD113-5-201ENST00000607261 78 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 AC007546.2-201ENST00000623996 360 ntBASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TTC39BQ5VTQ0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 RNU6-942P-201ENST00000363002 107 ntBASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 RNU6-326P-201ENST00000365480 107 ntBASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 SNORA62-201ENST00000365493 153 ntBASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 MIR518D-201ENST00000385014 87 ntBASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 SNORA53-201ENST00000391141 249 ntBASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 RNU1-139P-201ENST00000391307 165 ntBASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 RNU4-30P-201ENST00000410245 143 ntBASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 RNA5SP129-201ENST00000410276 118 ntBASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 TPT1P12-201ENST00000448968 492 ntBASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 AC074198.2-201ENST00000508153 258 ntBASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 RNU6-861P-201ENST00000516745 106 ntBASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.52□□□□□ -1.69
TTC39BQ5VTQ0 LINC00933-203ENST00000559812 219 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms