Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RPL37P10-201ENST00000412884 288 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 AL592148.1-201ENST00000413568 445 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 AC008716.1-201ENST00000511084 513 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 AC093303.1-201ENST00000514549 295 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 SNORA14.1-201ENST00000516113 141 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 EIF4BP1-201ENST00000554881 351 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 HMGB1P14-201ENST00000557424 591 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 H3F3AP1-201ENST00000559984 334 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 MIR4790-201ENST00000577799 79 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 LARP7P3-201ENST00000579888 337 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 MIR3671-201ENST00000580455 88 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 AC019193.3-201ENST00000609144 554 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 FTX_3.1-201ENST00000610451 147 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 AL162274.2-201ENST00000614406 332 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 AC008121.3-201ENST00000618726 433 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 AL031601.2-202ENST00000622650 282 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 AC099506.2-201ENST00000623074 221 ntBASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC44A4Q53GD3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AL513302.2-201ENST00000562313 1842 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 Y_RNA.146-201ENST00000363549 102 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 RNU6-266P-201ENST00000364225 107 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 SNORA22B-201ENST00000383876 138 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 Y_RNA.422-201ENST00000384054 114 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 RNU2-3P-201ENST00000410144 191 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 CYCSP33-201ENST00000414485 327 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AC007560.1-201ENST00000426912 237 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 RPL32P28-201ENST00000443577 397 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 SSXP4-201ENST00000451349 245 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 RNU7-152P-201ENST00000458982 64 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 RN7SL442P-201ENST00000473804 320 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 RNU6-572P-201ENST00000516724 80 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 RNU6-256P-201ENST00000516747 97 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 SNORA31.19-201ENST00000517079 126 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 RNA5SP454-201ENST00000517231 127 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 COPS8P3-201ENST00000526024 482 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AC011602.1-201ENST00000546484 331 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 MIR5692C1-201ENST00000585309 91 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AL451007.1-201ENST00000595491 289 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 FAM157A-202ENST00000615155 405 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AC244517.12-201ENST00000623581 663 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 Z83843.1-201ENST00000604070 3685 ntBASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.56□□□□□ -1.84
SLC44A4Q53GD3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 AL359693.1-201ENST00000614959 2407 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 AC138393.1-203ENST00000327086 343 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 Y_RNA.197-201ENST00000364004 102 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 RNU6-384P-201ENST00000364900 104 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 RNU6-805P-201ENST00000365643 106 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 MIR1289-1-201ENST00000408836 144 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 RN7SKP111-201ENST00000410349 271 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 RN7SKP158-201ENST00000410453 326 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 RN7SKP53-201ENST00000411337 315 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 AL353621.1-201ENST00000418219 243 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 AC099548.1-201ENST00000421443 426 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 COTL1P1-201ENST00000422309 375 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 RPS27P27-201ENST00000498779 255 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 FCF1P8-201ENST00000510322 597 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 RNU6-1046P-201ENST00000516538 107 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 MIR5004-201ENST00000579078 107 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms