Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 RPS15AP27-201ENST00000449183 343 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 RNU6-953P-201ENST00000459154 107 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 RNU7-66P-201ENST00000459469 62 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AC087588.1-201ENST00000462203 316 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AC083904.1-201ENST00000487828 231 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 RNU6-927P-201ENST00000516199 100 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AC026464.5-201ENST00000562497 722 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 MIR4795-201ENST00000584182 89 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 BNIP3P25-201ENST00000596023 559 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AL355877.2-201ENST00000603670 358 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AL138889.2-201ENST00000603883 242 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AC136601.2-201ENST00000604356 474 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 CTHRC1P1-201ENST00000605383 469 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AL158032.1-201ENST00000605401 106 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 ATP5A1P2-202ENST00000616464 443 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 MIR8057-201ENST00000620957 69 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AC108206.1-201ENST00000570186 4159 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC009487.2-201ENST00000420969 6821 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 HSPA8P4-201ENST00000511877 1920 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 RNU6-288P-201ENST00000363690 104 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 Y_RNA.184-201ENST00000363884 108 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 Y_RNA.301-201ENST00000364990 103 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 Y_RNA.399-201ENST00000383955 105 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 POLHP1-201ENST00000411806 470 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 USP9YP20-201ENST00000419224 558 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 MTND1P14-201ENST00000427400 950 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AL451062.2-201ENST00000427515 271 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AL591704.1-201ENST00000432574 275 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC104058.1-201ENST00000448028 297 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 RNU6-277P-201ENST00000516272 106 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 Y_RNA.675-201ENST00000516389 149 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 Y_RNA.691-201ENST00000516611 103 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AP002404.1-201ENST00000532005 451 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 MTCO3P23-201ENST00000561363 289 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC243960.4-201ENST00000600532 288 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AL353621.2-201ENST00000605340 133 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC022893.3-201ENST00000607665 437 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 FTX_3.1-201ENST00000610451 147 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC107871.2-201ENST00000612894 502 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC034102.8-201ENST00000615146 484 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC006026.1-201ENST00000444025 1803 ntBASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNAI3Q3KNW1 AC138915.1-201ENST00000565427 1685 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 RNU4-79P-201ENST00000362764 141 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 Y_RNA.414-201ENST00000384011 101 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 MIR181A2-201ENST00000384863 110 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 SNORA16.2-201ENST00000390991 127 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 SNORD70.1-201ENST00000391007 85 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 CISD1P1-201ENST00000393907 327 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 RPL21P75-201ENST00000396599 483 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 RPL21P28-201ENST00000401418 483 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 RNA5SP111-201ENST00000411386 101 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 AL669831.1-202ENST00000428504 417 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 AC022018.1-201ENST00000430685 241 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 AL591212.2-201ENST00000433923 257 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 RPS29P6-201ENST00000438196 145 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 GTF2IP13-201ENST00000438487 386 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 HMGB1P18-201ENST00000438801 619 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 RPL21P39-201ENST00000463605 483 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 RPL31P41-201ENST00000477967 372 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 AC087190.1-201ENST00000484462 480 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 RPS29P20-201ENST00000489592 171 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 AL160314.1-201ENST00000490836 438 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 AC093591.1-201ENST00000491435 481 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 RPL21P16-201ENST00000495531 483 ntBASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.5□□□□□ -2.01
SNAI3Q3KNW1 MRPS36P2-201ENST00000512569 299 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms