Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.45□□□□□ -2.18
SSX1Q16384 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.45□□□□□ -2.18
SSX1Q16384 IMMP1LP2-201ENST00000552954 492 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 MTND4P33-201ENST00000556706 766 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 AC110588.1-201ENST00000559699 137 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 AC093249.1-201ENST00000567049 203 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 AC026271.5-201ENST00000577873 130 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 MIR3118-1-201ENST00000581787 76 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 AP001004.1-201ENST00000582468 324 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 AC093788.1-201ENST00000609356 927 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
SSX1Q16384 AL773524.1-201ENST00000614065 229 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.45□□□□□ -2.18
SSX1Q16384 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SSX1Q16384 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SSX1Q16384 AL356432.1-201ENST00000405809 419 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 RNU2-48P-201ENST00000410694 191 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AC138623.1-201ENST00000418060 216 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AL158823.1-201ENST00000418441 478 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AC006366.1-201ENST00000422002 759 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.44□□□□□ -2.18
SSX1Q16384 RPL7P54-201ENST00000438336 674 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AL606517.1-201ENST00000446914 387 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.44□□□□□ -2.18
SSX1Q16384 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SSX1Q16384 AL137159.1-201ENST00000452808 512 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 snoU109.1-201ENST00000459339 135 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 UBE2DNL-203ENST00000474922 222 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.44□□□□□ -2.18
SSX1Q16384 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.44□□□□□ -2.18
SSX1Q16384 AC091965.2-201ENST00000512324 613 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AC116347.2-201ENST00000514912 523 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 RNU2-53P-201ENST00000516257 147 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 RNU5A-4P-201ENST00000516588 111 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 RNU6-586P-201ENST00000517265 104 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AC022616.6-201ENST00000520479 119 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 CYCSP27-201ENST00000527643 293 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 OR5AL2P-201ENST00000532185 920 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.44□□□□□ -2.18
SSX1Q16384 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.44□□□□□ -2.18
SSX1Q16384 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.44□□□□□ -2.18
SSX1Q16384 AC243960.4-201ENST00000600532 288 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AC073410.2-201ENST00000603240 332 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 SNRPGP17-201ENST00000603780 214 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AL022154.1-201ENST00000604698 785 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AC105148.1-201ENST00000604961 409 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AC121334.2-201ENST00000605387 271 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.44□□□□□ -2.18
SSX1Q16384 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.44□□□□□ -2.18
SSX1Q16384 AC024940.5-201ENST00000622889 474 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.44□□□□□ -2.18
SSX1Q16384 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.44□□□□□ -2.18
SSX1Q16384 MIR3529-201ENST00000637713 78 ntBASIC1.44□□□□□ -2.18
SSX1Q16384 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SSX1Q16384 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.44□□□□□ -2.18
SSX1Q16384 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SSX1Q16384 MIR186-201ENST00000384988 86 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 Y_RNA.623-201ENST00000411128 95 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 RN7SKP101-201ENST00000411376 320 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 MTCO2P8-201ENST00000412213 658 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 RPL23AP30-201ENST00000432419 501 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 RPL37P21-201ENST00000435890 276 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 AC004854.1-201ENST00000440356 349 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.43□□□□□ -2.18
SSX1Q16384 SSXP1-201ENST00000453640 473 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 AC006512.1-201ENST00000468816 291 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.43□□□□□ -2.18
SSX1Q16384 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.43□□□□□ -2.18
SSX1Q16384 RNU6-667P-201ENST00000517186 102 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.43□□□□□ -2.18
SSX1Q16384 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.43□□□□□ -2.18
SSX1Q16384 AC011979.2-201ENST00000527568 352 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 CBX3P4-201ENST00000538909 354 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 CR383656.8-201ENST00000549046 145 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 MTCO2P2-201ENST00000591258 225 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 BNIP3P30-201ENST00000601184 574 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 AC021646.1-201ENST00000605469 484 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 AL391834.2-201ENST00000609982 546 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 AC092106.3-201ENST00000611308 722 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 uc_338.5-201ENST00000611839 155 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 uc_338.15-201ENST00000615470 191 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 AL359314.1-201ENST00000616913 261 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 AL031667.3-201ENST00000620124 655 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 AL445523.1-201ENST00000451184 1362 ntBASIC1.43□□□□□ -2.18
SSX1Q16384 AL391994.1-201ENST00000254724 282 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 Y_RNA.18-201ENST00000362461 102 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 RNU5E-1-201ENST00000362477 120 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 SNORD3E-201ENST00000362899 217 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 Y_RNA.111-201ENST00000363248 100 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 RNU6-660P-201ENST00000364566 109 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 RNU6-487P-201ENST00000365430 104 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 RNU6-1200P-201ENST00000384162 107 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 RNU6-72P-201ENST00000384285 79 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 RNU6-809P-201ENST00000384461 107 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 RNU6-997P-201ENST00000384725 107 ntBASIC1.42□□□□□ -2.18
SSX1Q16384 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SSX1Q16384 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms