Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 AC105129.3-201ENST00000605455 485 ntBASIC1.99□□□□□ -2.09
SF3A2Q15428 AL359821.1-201ENST00000605519 182 ntBASIC1.99□□□□□ -2.09
SF3A2Q15428 AC004223.4-201ENST00000612426 332 ntBASIC1.99□□□□□ -2.09
SF3A2Q15428 AC091834.1-201ENST00000614543 472 ntBASIC1.99□□□□□ -2.09
SF3A2Q15428 YWHAEP7-203ENST00000622054 312 ntBASIC1.99□□□□□ -2.09
SF3A2Q15428 AC012640.5-201ENST00000623897 319 ntBASIC1.99□□□□□ -2.09
SF3A2Q15428 AC093591.3-201ENST00000634516 308 ntBASIC1.99□□□□□ -2.09
SF3A2Q15428 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SF3A2Q15428 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SF3A2Q15428 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SF3A2Q15428 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SF3A2Q15428 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.98□□□□□ -2.09
SF3A2Q15428 RNU6-486P-201ENST00000363116 107 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 Y_RNA.122-201ENST00000363331 96 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 RNU6-288P-201ENST00000363690 104 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 RNY4P16-201ENST00000364768 94 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 Z98749.2-208ENST00000381646 500 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SF3A2Q15428 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 U6atac.2-201ENST00000408644 118 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.98□□□□□ -2.09
SF3A2Q15428 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.98□□□□□ -2.09
SF3A2Q15428 HMGN2P38-201ENST00000423806 265 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 MTND4P25-201ENST00000441039 533 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.98□□□□□ -2.09
SF3A2Q15428 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.98□□□□□ -2.09
SF3A2Q15428 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.98□□□□□ -2.09
SF3A2Q15428 SNRPGP9-201ENST00000456025 225 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.98□□□□□ -2.09
SF3A2Q15428 AL163540.1-201ENST00000485382 386 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 SMURF2P1-201ENST00000514992 481 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.98□□□□□ -2.09
SF3A2Q15428 RNU1-40P-201ENST00000516816 164 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 RNU1-97P-201ENST00000516872 164 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
SF3A2Q15428 AL356432.3-201ENST00000568952 465 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.98□□□□□ -2.09
SF3A2Q15428 PIGPP4-201ENST00000584447 307 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 AC110760.3-201ENST00000598794 467 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 AC007363.1-201ENST00000604736 620 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 AC080013.6-201ENST00000606185 215 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 AC090970.3-201ENST00000612566 866 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 AC091931.1-201ENST00000623488 728 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 AF246928.1-201ENST00000623768 87 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SF3A2Q15428 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.98□□□□□ -2.09
SF3A2Q15428 ZNF355P-201ENST00000427301 3216 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 AL445523.1-201ENST00000451184 1362 ntBASIC1.98□□□□□ -2.09
SF3A2Q15428 AC131280.1-202ENST00000624067 4211 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SF3A2Q15428 RNU6-661P-201ENST00000362409 107 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 RNY1P10-201ENST00000363268 113 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 RNY3P13-201ENST00000365542 102 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 SNORD116-1-201ENST00000384335 95 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 Y_RNA.560-201ENST00000384689 102 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.97□□□□□ -2.09
SF3A2Q15428 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.97□□□□□ -2.09
SF3A2Q15428 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.97□□□□□ -2.09
SF3A2Q15428 RPS3AP44-201ENST00000425466 790 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.97□□□□□ -2.09
SF3A2Q15428 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.97□□□□□ -2.09
SF3A2Q15428 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.97□□□□□ -2.09
SF3A2Q15428 NDUFA5P4-201ENST00000436704 385 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 AC003989.2-201ENST00000440224 169 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 EPS15P1-201ENST00000448836 336 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 RPS27AP8-201ENST00000452665 445 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 ZNF114P1-201ENST00000453500 292 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.97□□□□□ -2.09
SF3A2Q15428 RPL30P6-201ENST00000475925 342 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 AC109486.1-201ENST00000486833 374 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 AC005178.1-201ENST00000508392 440 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.97□□□□□ -2.09
SF3A2Q15428 AC117532.1-201ENST00000514638 323 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 RNA5SP112-201ENST00000515937 99 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 RNU6-678P-201ENST00000516832 109 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
SF3A2Q15428 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.97□□□□□ -2.09
SF3A2Q15428 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.97□□□□□ -2.09
SF3A2Q15428 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.97□□□□□ -2.09
SF3A2Q15428 AL133241.1-201ENST00000556832 487 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.97□□□□□ -2.09
SF3A2Q15428 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.97□□□□□ -2.09
SF3A2Q15428 MIR3915-201ENST00000578518 97 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.97□□□□□ -2.09
SF3A2Q15428 MTCYBP22-201ENST00000603788 447 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.97□□□□□ -2.09
SF3A2Q15428 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
SF3A2Q15428 AC009090.3-201ENST00000616553 565 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 AC024581.2-201ENST00000619986 252 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 AC007494.3-201ENST00000624660 743 ntBASIC1.97□□□□□ -2.09
SF3A2Q15428 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SF3A2Q15428 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.96□□□□□ -2.09
SF3A2Q15428 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.96□□□□□ -2.1
SF3A2Q15428 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SF3A2Q15428 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SF3A2Q15428 Y_RNA.116-201ENST00000363292 103 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 U8.10-201ENST00000384260 133 ntBASIC1.96□□□□□ -2.1
SF3A2Q15428 AL031577.2-201ENST00000404133 280 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms