Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.72□□□□□ -1.81
IRF9Q00978 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.72□□□□□ -1.81
IRF9Q00978 AC091812.1-201ENST00000432235 1948 ntBASIC3.72□□□□□ -1.81
IRF9Q00978 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
IRF9Q00978 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
IRF9Q00978 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
IRF9Q00978 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
IRF9Q00978 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.71□□□□□ -1.82
IRF9Q00978 MIR372-201ENST00000362225 67 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 Y_RNA.126-201ENST00000363382 111 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 RNU6-527P-201ENST00000363425 104 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 RNA5SP515-201ENST00000364570 118 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 RNU4-42P-201ENST00000364738 142 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 RNU6-283P-201ENST00000364788 107 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 Y_RNA.389-201ENST00000383924 113 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 RNU6-196P-201ENST00000384315 107 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 Y_RNA.557-201ENST00000384680 107 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 MIR625-201ENST00000385047 85 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.71□□□□□ -1.82
IRF9Q00978 HMGB3P2-201ENST00000411913 584 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.71□□□□□ -1.82
IRF9Q00978 AC096644.2-201ENST00000429278 159 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.71□□□□□ -1.82
IRF9Q00978 AL590664.1-201ENST00000448065 339 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 AC079354.2-201ENST00000453523 154 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
IRF9Q00978 RPS29P20-201ENST00000489592 171 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.71□□□□□ -1.82
IRF9Q00978 HSBP1P1-201ENST00000555205 166 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 AL391261.3-201ENST00000557194 520 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 AC020895.1-201ENST00000595362 272 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 HSPE1P7-201ENST00000604681 321 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 MTND4LP5-201ENST00000605152 292 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 AL132822.1-201ENST00000617063 513 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 AC002076.2-201ENST00000617362 122 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 MIR6076-201ENST00000617521 113 ntBASIC3.71□□□□□ -1.82
IRF9Q00978 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
IRF9Q00978 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.7□□□□□ -1.82
IRF9Q00978 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
IRF9Q00978 SPRR2C-201ENST00000290702 219 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 RNU1-100P-201ENST00000365255 165 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 U1.1-201ENST00000384101 164 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 RNU6-784P-201ENST00000384330 106 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 SNORA57.1-201ENST00000391227 145 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 RNU6-101P-201ENST00000410323 104 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 RAB9AP3-201ENST00000412737 573 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 AC002075.2-201ENST00000425207 252 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 MTCYBP9-201ENST00000431021 303 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 OR4C10P-201ENST00000434991 931 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.7□□□□□ -1.82
IRF9Q00978 RPS3AP46-201ENST00000448352 682 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 AL162151.2-201ENST00000448875 158 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.7□□□□□ -1.82
IRF9Q00978 RAB9AP1-201ENST00000449393 573 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.7□□□□□ -1.82
IRF9Q00978 MTCO2P24-201ENST00000515611 426 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 NACAP3-201ENST00000552100 481 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.7□□□□□ -1.82
IRF9Q00978 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 AC008269.2-201ENST00000561915 1105 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 KLKP1-201ENST00000595979 403 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 VN1R85P-201ENST00000601587 426 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 MIR1244-1-201ENST00000612829 85 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 AC097372.5-201ENST00000623665 376 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.7□□□□□ -1.82
IRF9Q00978 MIR1244-3-201ENST00000635744 85 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 MIR1244-2-201ENST00000636449 85 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 MIR1244-4-202ENST00000636813 85 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 MTND5P1-201ENST00000445440 1375 ntBASIC3.7□□□□□ -1.82
IRF9Q00978 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.7□□□□□ -1.82
IRF9Q00978 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.7□□□□□ -1.82
IRF9Q00978 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
IRF9Q00978 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
IRF9Q00978 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.69□□□□□ -1.82
IRF9Q00978 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
IRF9Q00978 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
IRF9Q00978 MAPK10-372ENST00000641954 3413 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
IRF9Q00978 Y_RNA.123-201ENST00000363338 102 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 Y_RNA.153-201ENST00000363615 91 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 RNU6-450P-201ENST00000364654 107 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 RNU1-13P-201ENST00000384499 162 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 RNU6-823P-201ENST00000391042 103 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 RNU6-700P-201ENST00000391043 107 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 BTF3L4P2-201ENST00000392798 346 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 RNU6-628P-201ENST00000410675 107 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 AP000275.1-201ENST00000411943 390 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.69□□□□□ -1.82
IRF9Q00978 AC007098.1-201ENST00000420122 367 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.69□□□□□ -1.82
IRF9Q00978 RPS29P31-201ENST00000446147 164 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 AC125238.1-201ENST00000448842 249 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 CHEK2P4-201ENST00000450340 246 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.69□□□□□ -1.82
IRF9Q00978 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.69□□□□□ -1.82
IRF9Q00978 RPL30P14-201ENST00000482744 348 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 RPL32P34-201ENST00000486380 400 ntBASIC3.69□□□□□ -1.82
IRF9Q00978 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.69□□□□□ -1.82
IRF9Q00978 AL451007.1-201ENST00000595491 289 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms