Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.53□□□□□ -2
CX3CL1P78423 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CX3CL1P78423 RNU6-858P-201ENST00000362436 107 ntBASIC2.53□□□□□ -2
CX3CL1P78423 MIR34B-201ENST00000385076 84 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AL162578.1-201ENST00000406202 378 ntBASIC2.53□□□□□ -2
CX3CL1P78423 SNORA11-201ENST00000408789 128 ntBASIC2.53□□□□□ -2
CX3CL1P78423 RNU6-1148P-201ENST00000410992 104 ntBASIC2.53□□□□□ -2
CX3CL1P78423 RNA5SP344-201ENST00000411081 104 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AC245054.2-201ENST00000415639 319 ntBASIC2.53□□□□□ -2
CX3CL1P78423 RPL7P10-201ENST00000417407 739 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.53□□□□□ -2
CX3CL1P78423 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.53□□□□□ -2
CX3CL1P78423 AC009296.1-201ENST00000443146 155 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.53□□□□□ -2
CX3CL1P78423 RNU7-66P-201ENST00000459469 62 ntBASIC2.53□□□□□ -2
CX3CL1P78423 RNU7-138P-201ENST00000459479 64 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AC007547.1-201ENST00000462177 490 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AC107626.1-201ENST00000471084 183 ntBASIC2.53□□□□□ -2
CX3CL1P78423 RPL23AP45-201ENST00000476406 468 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.53□□□□□ -2
CX3CL1P78423 GZMAP1-201ENST00000503054 631 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.53□□□□□ -2
CX3CL1P78423 SCARNA17.1-201ENST00000516211 143 ntBASIC2.53□□□□□ -2
CX3CL1P78423 SCARNA17.2-201ENST00000516334 143 ntBASIC2.53□□□□□ -2
CX3CL1P78423 SNORA43.2-201ENST00000516652 128 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AF235103.2-201ENST00000525753 346 ntBASIC2.53□□□□□ -2
CX3CL1P78423 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.53□□□□□ -2
CX3CL1P78423 AP000763.2-201ENST00000540641 163 ntBASIC2.53□□□□□ -2
CX3CL1P78423 GLYCAM1-201ENST00000546596 285 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.53□□□□□ -2
CX3CL1P78423 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.53□□□□□ -2
CX3CL1P78423 MIR4801-201ENST00000582704 82 ntBASIC2.53□□□□□ -2
CX3CL1P78423 RNU6-85P-201ENST00000605989 107 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AL357078.3-201ENST00000607528 618 ntBASIC2.53□□□□□ -2
CX3CL1P78423 AC069200.1-201ENST00000609511 323 ntBASIC2.53□□□□□ -2
CX3CL1P78423 uc_338.25-201ENST00000613756 156 ntBASIC2.53□□□□□ -2
CX3CL1P78423 SCARNA17.4-201ENST00000614296 143 ntBASIC2.53□□□□□ -2
CX3CL1P78423 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CX3CL1P78423 ZNF519P1-201ENST00000449011 1626 ntBASIC2.53□□□□□ -2
CX3CL1P78423 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.53□□□□□ -2.01
CX3CL1P78423 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.52□□□□□ -2.01
CX3CL1P78423 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CX3CL1P78423 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.52□□□□□ -2.01
CX3CL1P78423 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CX3CL1P78423 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.52□□□□□ -2.01
CX3CL1P78423 AC138393.1-203ENST00000327086 343 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 Y_RNA.86-201ENST00000363020 111 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 Y_RNA.100-201ENST00000363141 102 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 RNU5E-7P-201ENST00000365290 117 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.52□□□□□ -2.01
CX3CL1P78423 SNORD21-201ENST00000383953 95 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 RNU6-748P-201ENST00000384648 107 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 AL031121.1-201ENST00000406553 254 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 AL356776.1-201ENST00000406574 447 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 RNU4-47P-201ENST00000410876 114 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 RNA5SP120-201ENST00000410900 112 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 SNORD56-201ENST00000413522 71 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 AL096701.2-201ENST00000416920 238 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 USP9YP20-201ENST00000419224 558 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 AC004383.1-201ENST00000438135 289 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 OSTCP8-201ENST00000445117 448 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 MED28P2-201ENST00000475771 317 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 FAM206BP-201ENST00000510179 541 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.52□□□□□ -2.01
CX3CL1P78423 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.52□□□□□ -2.01
CX3CL1P78423 RNU6-1314P-201ENST00000517139 104 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 BTF3P12-201ENST00000519620 469 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 AC090136.1-201ENST00000520009 240 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 RNU6-323P-201ENST00000521915 107 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 AC009163.5-201ENST00000575421 637 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.52□□□□□ -2.01
CX3CL1P78423 AP001094.1-201ENST00000579805 193 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 AC010620.2-201ENST00000600135 313 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 AC024153.1-201ENST00000603103 365 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 FAM157A-202ENST00000615155 405 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.52□□□□□ -2.01
CX3CL1P78423 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CX3CL1P78423 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CX3CL1P78423 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CX3CL1P78423 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CX3CL1P78423 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.51□□□□□ -2.01
CX3CL1P78423 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CX3CL1P78423 SNORA63.1-201ENST00000362493 131 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 SNORD116-20-201ENST00000384529 92 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 Y_RNA.530-201ENST00000384587 101 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 MIR147B-201ENST00000390185 80 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 AC009161.1-201ENST00000417306 376 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 ATG3P1-201ENST00000419507 911 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 AL139413.1-201ENST00000421309 217 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 AL513185.2-201ENST00000425543 193 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.51□□□□□ -2.01
CX3CL1P78423 Z75741.1-201ENST00000446793 314 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 RPL31P58-201ENST00000469001 379 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 RPL27AP5-201ENST00000469428 449 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 AP000852.1-201ENST00000472460 573 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 AC109925.1-201ENST00000478069 331 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.51□□□□□ -2.01
CX3CL1P78423 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.51□□□□□ -2.01
CX3CL1P78423 SEM1P1-201ENST00000506694 209 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms