Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
VSX2P58304 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.8□□□□□ -2.12
VSX2P58304 ZNF72P-201ENST00000425869 1908 ntBASIC1.79□□□□□ -2.12
VSX2P58304 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.79□□□□□ -2.12
VSX2P58304 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VSX2P58304 SNORD3E-201ENST00000362899 217 ntBASIC1.79□□□□□ -2.12
VSX2P58304 SNORD56.2-201ENST00000363242 71 ntBASIC1.79□□□□□ -2.12
VSX2P58304 Y_RNA.608-201ENST00000410647 95 ntBASIC1.79□□□□□ -2.12
VSX2P58304 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.79□□□□□ -2.12
VSX2P58304 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.79□□□□□ -2.12
VSX2P58304 AL589872.1-201ENST00000426602 288 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.79□□□□□ -2.12
VSX2P58304 MTCYBP39-201ENST00000437562 491 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.79□□□□□ -2.12
VSX2P58304 AL078601.1-201ENST00000444542 271 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AC007677.1-201ENST00000445757 515 ntBASIC1.79□□□□□ -2.12
VSX2P58304 RPL7P12-201ENST00000446719 750 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AC104058.1-201ENST00000448028 297 ntBASIC1.79□□□□□ -2.12
VSX2P58304 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.79□□□□□ -2.12
VSX2P58304 ZNF114P1-201ENST00000453500 292 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.79□□□□□ -2.12
VSX2P58304 MTND2P14-201ENST00000482139 351 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AC140059.1-201ENST00000489238 361 ntBASIC1.79□□□□□ -2.12
VSX2P58304 RPL23AP63-201ENST00000498752 471 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AC112204.1-201ENST00000502591 103 ntBASIC1.79□□□□□ -2.12
VSX2P58304 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.79□□□□□ -2.12
VSX2P58304 MRPS33P3-201ENST00000513456 322 ntBASIC1.79□□□□□ -2.12
VSX2P58304 RNA5SP182-201ENST00000516064 82 ntBASIC1.79□□□□□ -2.12
VSX2P58304 MIR892C-201ENST00000516410 77 ntBASIC1.79□□□□□ -2.12
VSX2P58304 RNU6-677P-201ENST00000516914 101 ntBASIC1.79□□□□□ -2.12
VSX2P58304 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.79□□□□□ -2.12
VSX2P58304 AC079598.5-201ENST00000547460 117 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AL157871.3-201ENST00000557231 293 ntBASIC1.79□□□□□ -2.12
VSX2P58304 PCMTD1P2-201ENST00000565017 355 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.79□□□□□ -2.12
VSX2P58304 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.79□□□□□ -2.12
VSX2P58304 AP002360.4-201ENST00000606980 481 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AL031775.1-201ENST00000607014 887 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AP000240.1-201ENST00000609910 452 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AL627230.6-201ENST00000611129 280 ntBASIC1.79□□□□□ -2.12
VSX2P58304 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AC092140.2-201ENST00000618027 521 ntBASIC1.79□□□□□ -2.12
VSX2P58304 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.79□□□□□ -2.12
VSX2P58304 AC006927.3-201ENST00000638789 384 ntBASIC1.79□□□□□ -2.12
VSX2P58304 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VSX2P58304 TEX21P-201ENST00000447107 1476 ntBASIC1.78□□□□□ -2.12
VSX2P58304 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VSX2P58304 RNU6-1032P-201ENST00000384100 107 ntBASIC1.78□□□□□ -2.12
VSX2P58304 RNU6-748P-201ENST00000384648 107 ntBASIC1.78□□□□□ -2.12
VSX2P58304 SUMO2P12-201ENST00000405924 140 ntBASIC1.78□□□□□ -2.12
VSX2P58304 AL031779.1-201ENST00000415663 330 ntBASIC1.78□□□□□ -2.12
VSX2P58304 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.78□□□□□ -2.12
VSX2P58304 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.78□□□□□ -2.12
VSX2P58304 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.78□□□□□ -2.12
VSX2P58304 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.78□□□□□ -2.12
VSX2P58304 MTND5P2-201ENST00000442927 1142 ntBASIC1.78□□□□□ -2.12
VSX2P58304 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.78□□□□□ -2.12
VSX2P58304 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.78□□□□□ -2.12
VSX2P58304 MTND1P12-201ENST00000455231 147 ntBASIC1.78□□□□□ -2.12
VSX2P58304 BTF3P15-201ENST00000455606 336 ntBASIC1.78□□□□□ -2.12
VSX2P58304 AL583843.1-201ENST00000456070 346 ntBASIC1.78□□□□□ -2.12
VSX2P58304 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.78□□□□□ -2.12
VSX2P58304 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.78□□□□□ -2.12
VSX2P58304 AC055731.1-201ENST00000474387 401 ntBASIC1.78□□□□□ -2.12
VSX2P58304 RN7SKP265-201ENST00000516448 223 ntBASIC1.78□□□□□ -2.12
VSX2P58304 RNU6-1220P-201ENST00000517126 108 ntBASIC1.78□□□□□ -2.12
VSX2P58304 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.78□□□□□ -2.12
VSX2P58304 AC092325.1-201ENST00000566449 554 ntBASIC1.78□□□□□ -2.12
VSX2P58304 AC009977.1-201ENST00000586015 570 ntBASIC1.78□□□□□ -2.12
VSX2P58304 HMGN1P30-201ENST00000589286 268 ntBASIC1.78□□□□□ -2.12
VSX2P58304 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
VSX2P58304 AC011494.1-201ENST00000596454 237 ntBASIC1.78□□□□□ -2.12
VSX2P58304 DEFB131E-202ENST00000602581 683 ntBASIC1.78□□□□□ -2.12
VSX2P58304 MIR6845-201ENST00000613182 61 ntBASIC1.78□□□□□ -2.12
VSX2P58304 AL353997.5-201ENST00000618886 171 ntBASIC1.78□□□□□ -2.12
VSX2P58304 DUXAP9-208ENST00000622815 614 ntBASIC1.78□□□□□ -2.12
VSX2P58304 AC024940.5-201ENST00000622889 474 ntBASIC1.78□□□□□ -2.12
VSX2P58304 FRG1KP-201ENST00000623592 341 ntBASIC1.78□□□□□ -2.12
VSX2P58304 AC017037.3-201ENST00000625016 472 ntBASIC1.78□□□□□ -2.12
VSX2P58304 Y_RNA.33-201ENST00000362591 102 ntBASIC1.77□□□□□ -2.13
VSX2P58304 RNA5SP99-201ENST00000364020 114 ntBASIC1.77□□□□□ -2.13
VSX2P58304 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.77□□□□□ -2.13
VSX2P58304 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.77□□□□□ -2.13
VSX2P58304 CALM2P2-201ENST00000428512 440 ntBASIC1.77□□□□□ -2.13
VSX2P58304 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.77□□□□□ -2.13
VSX2P58304 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.77□□□□□ -2.13
VSX2P58304 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.77□□□□□ -2.13
VSX2P58304 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.77□□□□□ -2.13
VSX2P58304 RNU5B-3P-201ENST00000516601 115 ntBASIC1.77□□□□□ -2.13
VSX2P58304 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.77□□□□□ -2.13
VSX2P58304 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.77□□□□□ -2.13
VSX2P58304 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.77□□□□□ -2.13
VSX2P58304 AK6P1-201ENST00000540219 478 ntBASIC1.77□□□□□ -2.13
VSX2P58304 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.77□□□□□ -2.13
VSX2P58304 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.77□□□□□ -2.13
VSX2P58304 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.77□□□□□ -2.13
VSX2P58304 AC233702.2-202ENST00000562547 291 ntBASIC1.77□□□□□ -2.13
VSX2P58304 AC234772.3-201ENST00000602277 528 ntBASIC1.77□□□□□ -2.13
VSX2P58304 AC174048.1-201ENST00000603389 144 ntBASIC1.77□□□□□ -2.13
VSX2P58304 AL670379.10-201ENST00000604330 253 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms