Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
HMGCS2P54868 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HMGCS2P54868 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.42□□□□□ -2.02
HMGCS2P54868 RNU6-61P-201ENST00000365528 109 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 RNU6-1042P-201ENST00000384204 107 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 RNU6-140P-201ENST00000384566 108 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 Y_RNA.534-201ENST00000384599 112 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 SNORA26.9-201ENST00000391322 122 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 AL139156.1-201ENST00000412785 841 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.42□□□□□ -2.02
HMGCS2P54868 CYCSP49-201ENST00000420810 319 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 SRIP2-201ENST00000428470 166 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.42□□□□□ -2.02
HMGCS2P54868 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.42□□□□□ -2.02
HMGCS2P54868 AC007677.1-201ENST00000445757 515 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 DDX3P2-201ENST00000446138 111 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 AC079781.2-201ENST00000446424 169 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.42□□□□□ -2.02
HMGCS2P54868 CECR9-201ENST00000453421 199 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 RPL23AP70-201ENST00000483361 460 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 RPL39P36-201ENST00000490784 156 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 AIG1P1-201ENST00000503376 148 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 SUMO2P6-201ENST00000505273 288 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 HMGB1P29-201ENST00000505659 499 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 AC113155.1-201ENST00000511141 769 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 RNU6-720P-201ENST00000516363 108 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 RNU6-410P-201ENST00000517006 107 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 AP000889.2-201ENST00000532684 490 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.42□□□□□ -2.02
HMGCS2P54868 EIF1P4-201ENST00000572664 335 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 AC025449.1-201ENST00000603896 529 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 FTX_3.1-201ENST00000610451 147 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 AC015540.1-201ENST00000615828 501 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 AC009161.2-201ENST00000624626 138 ntBASIC2.42□□□□□ -2.02
HMGCS2P54868 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.42□□□□□ -2.02
HMGCS2P54868 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.42□□□□□ -2.02
HMGCS2P54868 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HMGCS2P54868 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HMGCS2P54868 Y_RNA.3-201ENST00000362331 103 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 Y_RNA.245-201ENST00000364493 95 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 RNU6-641P-201ENST00000384006 107 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 RNU6-456P-201ENST00000384493 107 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGCS2P54868 AL031779.1-201ENST00000415663 330 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGCS2P54868 AL109913.1-201ENST00000421173 514 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AL353193.1-201ENST00000421444 268 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 RPL7P54-201ENST00000438336 674 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.41□□□□□ -2.02
HMGCS2P54868 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGCS2P54868 RPL12P25-201ENST00000455592 494 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AC023194.1-201ENST00000493084 308 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AC082651.2-201ENST00000496833 166 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AC116562.3-201ENST00000506136 177 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AC117522.1-201ENST00000509821 380 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AC108078.2-201ENST00000510750 236 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 Y_RNA.689-201ENST00000516589 107 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 RNA5SP290-201ENST00000517133 127 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 COX6CP5-201ENST00000527162 228 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AC068587.5-201ENST00000528506 175 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGCS2P54868 SUB1P2-201ENST00000556401 297 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AC174048.1-201ENST00000603389 144 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 Z84480.1-201ENST00000605131 311 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 AC022893.3-201ENST00000607665 437 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HMGCS2P54868 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.41□□□□□ -2.02
HMGCS2P54868 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.41□□□□□ -2.02
HMGCS2P54868 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGCS2P54868 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.41□□□□□ -2.02
HMGCS2P54868 OR5AK4P-201ENST00000635912 903 ntBASIC2.41□□□□□ -2.02
HMGCS2P54868 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.41□□□□□ -2.02
HMGCS2P54868 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.4□□□□□ -2.02
HMGCS2P54868 AC103710.2-202ENST00000641454 2853 ntBASIC2.4□□□□□ -2.02
HMGCS2P54868 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.4□□□□□ -2.02
HMGCS2P54868 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HMGCS2P54868 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGCS2P54868 Y_RNA.296-201ENST00000364930 108 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HMGCS2P54868 SET-203ENST00000372688 801 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGCS2P54868 AC068050.1-201ENST00000394891 380 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGCS2P54868 ZNF863P-201ENST00000426746 417 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 AL592045.1-201ENST00000429867 352 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGCS2P54868 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.4□□□□□ -2.03
HMGCS2P54868 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.4□□□□□ -2.03
HMGCS2P54868 MRPS17P3-201ENST00000465453 385 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 RBBP4P6-201ENST00000508098 202 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 SNORA31.18-201ENST00000517043 134 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGCS2P54868 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.4□□□□□ -2.03
HMGCS2P54868 AC078814.3-201ENST00000553036 491 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.4□□□□□ -2.03
HMGCS2P54868 MIR4775-201ENST00000581168 75 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 AC008521.1-201ENST00000587471 187 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.4□□□□□ -2.03
HMGCS2P54868 AL356575.1-201ENST00000603008 283 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms