Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.62□□□□□ -1.51
NUBP1P53384 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUBP1P53384 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.61□□□□□ -1.51
NUBP1P53384 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
NUBP1P53384 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
NUBP1P53384 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
NUBP1P53384 Y_RNA.796-201ENST00000364268 102 ntBASIC5.61□□□□□ -1.51
NUBP1P53384 Y_RNA.799-201ENST00000364992 102 ntBASIC5.61□□□□□ -1.51
NUBP1P53384 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
NUBP1P53384 RNU6-813P-201ENST00000384691 107 ntBASIC5.61□□□□□ -1.51
NUBP1P53384 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.61□□□□□ -1.51
NUBP1P53384 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 NDUFB1P1-201ENST00000435191 180 ntBASIC5.61□□□□□ -1.51
NUBP1P53384 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
NUBP1P53384 AC011406.1-201ENST00000512440 370 ntBASIC5.61□□□□□ -1.51
NUBP1P53384 RNU6-1098P-201ENST00000516772 96 ntBASIC5.61□□□□□ -1.51
NUBP1P53384 IGKV1-32-201ENST00000519290 311 ntBASIC5.61□□□□□ -1.51
NUBP1P53384 IGHVIII-67-2-201ENST00000519849 88 ntBASIC5.61□□□□□ -1.51
NUBP1P53384 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.61□□□□□ -1.51
NUBP1P53384 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.61□□□□□ -1.51
NUBP1P53384 AC141557.1-201ENST00000540982 400 ntBASIC5.61□□□□□ -1.51
NUBP1P53384 PARP1P2-201ENST00000556806 195 ntBASIC5.61□□□□□ -1.51
NUBP1P53384 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NUBP1P53384 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.61□□□□□ -1.51
NUBP1P53384 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 AC016588.2-201ENST00000632484 3021 ntBASIC5.61□□□□□ -1.51
NUBP1P53384 AL136964.1-201ENST00000622038 2990 ntBASIC5.61□□□□□ -1.51
NUBP1P53384 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NUBP1P53384 AL137141.1-201ENST00000624622 4836 ntBASIC5.6□□□□□ -1.51
NUBP1P53384 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUBP1P53384 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
NUBP1P53384 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.6□□□□□ -1.51
NUBP1P53384 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC5.6□□□□□ -1.51
NUBP1P53384 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
NUBP1P53384 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.6□□□□□ -1.51
NUBP1P53384 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
NUBP1P53384 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUBP1P53384 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NUBP1P53384 MIR302B-201ENST00000362188 73 ntBASIC5.6□□□□□ -1.51
NUBP1P53384 Y_RNA.93-201ENST00000363066 109 ntBASIC5.6□□□□□ -1.51
NUBP1P53384 RN7SKP113-201ENST00000363891 295 ntBASIC5.6□□□□□ -1.51
NUBP1P53384 RN7SKP27-201ENST00000410684 333 ntBASIC5.6□□□□□ -1.51
NUBP1P53384 AC245102.2-201ENST00000448956 180 ntBASIC5.6□□□□□ -1.51
NUBP1P53384 AC093663.1-201ENST00000497190 394 ntBASIC5.6□□□□□ -1.51
NUBP1P53384 AC078918.1-201ENST00000498515 228 ntBASIC5.6□□□□□ -1.51
NUBP1P53384 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUBP1P53384 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUBP1P53384 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.6□□□□□ -1.51
NUBP1P53384 AL022323.4-201ENST00000623980 13120 ntBASIC5.6□□□□□ -1.51
NUBP1P53384 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NUBP1P53384 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUBP1P53384 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NUBP1P53384 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUBP1P53384 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NUBP1P53384 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUBP1P53384 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUBP1P53384 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NUBP1P53384 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NUBP1P53384 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NUBP1P53384 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NUBP1P53384 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NUBP1P53384 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
NUBP1P53384 RNA5SP123-201ENST00000363244 119 ntBASIC5.59□□□□□ -1.51
NUBP1P53384 RNU6-414P-201ENST00000363705 104 ntBASIC5.59□□□□□ -1.51
NUBP1P53384 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NUBP1P53384 COX6B1P1-201ENST00000415962 213 ntBASIC5.59□□□□□ -1.51
NUBP1P53384 AL445687.1-201ENST00000439946 251 ntBASIC5.59□□□□□ -1.51
NUBP1P53384 AL591623.2-201ENST00000449978 222 ntBASIC5.59□□□□□ -1.51
NUBP1P53384 MIR4311-201ENST00000580794 100 ntBASIC5.59□□□□□ -1.51
NUBP1P53384 AC008745.1-201ENST00000604064 271 ntBASIC5.59□□□□□ -1.51
NUBP1P53384 AC109583.2-201ENST00000617367 129 ntBASIC5.59□□□□□ -1.51
NUBP1P53384 MIR3202-2-201ENST00000635980 79 ntBASIC5.59□□□□□ -1.51
NUBP1P53384 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.59□□□□□ -1.51
NUBP1P53384 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.59□□□□□ -1.51
NUBP1P53384 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NUBP1P53384 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.59□□□□□ -1.51
NUBP1P53384 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NUBP1P53384 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NUBP1P53384 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUBP1P53384 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
NUBP1P53384 MIR133B-201ENST00000362210 119 ntBASIC5.58□□□□□ -1.52
NUBP1P53384 RNU6-117P-201ENST00000365415 107 ntBASIC5.58□□□□□ -1.52
NUBP1P53384 SNORA1-201ENST00000384107 130 ntBASIC5.58□□□□□ -1.52
NUBP1P53384 RNU11-201ENST00000387069 134 ntBASIC5.58□□□□□ -1.52
NUBP1P53384 AL031121.1-201ENST00000406553 254 ntBASIC5.58□□□□□ -1.52
NUBP1P53384 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.58□□□□□ -1.52
NUBP1P53384 ACA64.4-201ENST00000459070 127 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms