Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RN7SKP250-201ENST00000363924 321 ntBASIC2.53□□□□□ -2
PCP4P48539 RNU4-42P-201ENST00000364738 142 ntBASIC2.53□□□□□ -2
PCP4P48539 RNA5SP240-201ENST00000365355 128 ntBASIC2.53□□□□□ -2
PCP4P48539 SNORA18.2-201ENST00000383865 132 ntBASIC2.53□□□□□ -2
PCP4P48539 SNORA22B-201ENST00000383876 138 ntBASIC2.53□□□□□ -2
PCP4P48539 Y_RNA.485-201ENST00000384395 102 ntBASIC2.53□□□□□ -2
PCP4P48539 RNU6-1011P-201ENST00000384668 107 ntBASIC2.53□□□□□ -2
PCP4P48539 Y_RNA.557-201ENST00000384680 107 ntBASIC2.53□□□□□ -2
PCP4P48539 MIR637-201ENST00000385000 99 ntBASIC2.53□□□□□ -2
PCP4P48539 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC2.53□□□□□ -2
PCP4P48539 MIR1302-11-201ENST00000408051 138 ntBASIC2.53□□□□□ -2
PCP4P48539 MIR1302-9-201ENST00000408365 138 ntBASIC2.53□□□□□ -2
PCP4P48539 MIR1302-10-201ENST00000408734 138 ntBASIC2.53□□□□□ -2
PCP4P48539 Y_RNA.605-201ENST00000410577 105 ntBASIC2.53□□□□□ -2
PCP4P48539 RNU4-6P-201ENST00000410804 122 ntBASIC2.53□□□□□ -2
PCP4P48539 RN7SKP168-201ENST00000410910 300 ntBASIC2.53□□□□□ -2
PCP4P48539 RNU2-32P-201ENST00000411193 191 ntBASIC2.53□□□□□ -2
PCP4P48539 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC2.53□□□□□ -2
PCP4P48539 USP9YP16-201ENST00000430287 407 ntBASIC2.53□□□□□ -2
PCP4P48539 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC2.53□□□□□ -2
PCP4P48539 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC2.53□□□□□ -2
PCP4P48539 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.53□□□□□ -2
PCP4P48539 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.53□□□□□ -2
PCP4P48539 USP9YP23-201ENST00000455085 407 ntBASIC2.53□□□□□ -2
PCP4P48539 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.53□□□□□ -2
PCP4P48539 RN7SL337P-201ENST00000462468 301 ntBASIC2.53□□□□□ -2
PCP4P48539 RN7SL308P-201ENST00000464971 297 ntBASIC2.53□□□□□ -2
PCP4P48539 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC2.53□□□□□ -2
PCP4P48539 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC2.53□□□□□ -2
PCP4P48539 RAC1P2-201ENST00000511164 579 ntBASIC2.53□□□□□ -2
PCP4P48539 AC108043.1-201ENST00000512696 574 ntBASIC2.53□□□□□ -2
PCP4P48539 SCARNA16.4-201ENST00000516956 187 ntBASIC2.53□□□□□ -2
PCP4P48539 RN7SKP295-201ENST00000517264 153 ntBASIC2.53□□□□□ -2
PCP4P48539 RNA5SP179-201ENST00000517284 121 ntBASIC2.53□□□□□ -2
PCP4P48539 CARSP2-201ENST00000520688 277 ntBASIC2.53□□□□□ -2
PCP4P48539 AC004486.1-201ENST00000546846 233 ntBASIC2.53□□□□□ -2
PCP4P48539 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC2.53□□□□□ -2
PCP4P48539 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.53□□□□□ -2
PCP4P48539 AL049833.2-201ENST00000557211 750 ntTSL 3 BASIC2.53□□□□□ -2
PCP4P48539 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.53□□□□□ -2
PCP4P48539 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC2.53□□□□□ -2
PCP4P48539 MIR3138-201ENST00000585238 82 ntBASIC2.53□□□□□ -2
PCP4P48539 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.53□□□□□ -2
PCP4P48539 MIR1302-2-201ENST00000607096 138 ntBASIC2.53□□□□□ -2
PCP4P48539 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.53□□□□□ -2
PCP4P48539 MIR8078-201ENST00000619811 84 ntBASIC2.53□□□□□ -2
PCP4P48539 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC2.53□□□□□ -2
PCP4P48539 MIR193BHG-210ENST00000641327 515 ntBASIC2.53□□□□□ -2
PCP4P48539 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.53□□□□□ -2
PCP4P48539 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.53□□□□□ -2
PCP4P48539 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
PCP4P48539 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
PCP4P48539 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PCP4P48539 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.52□□□□□ -2.01
PCP4P48539 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCP4P48539 SNORD115-8-201ENST00000363856 82 ntBASIC2.52□□□□□ -2.01
PCP4P48539 SNORD115-38-201ENST00000365037 82 ntBASIC2.52□□□□□ -2.01
PCP4P48539 MIR10B-201ENST00000385011 110 ntBASIC2.52□□□□□ -2.01
PCP4P48539 SNORA69.1-201ENST00000390904 137 ntBASIC2.52□□□□□ -2.01
PCP4P48539 RNU6-159P-201ENST00000391080 106 ntBASIC2.52□□□□□ -2.01
PCP4P48539 MCFD2P1-201ENST00000417812 300 ntBASIC2.52□□□□□ -2.01
PCP4P48539 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.52□□□□□ -2.01
PCP4P48539 AL160004.2-201ENST00000432935 350 ntBASIC2.52□□□□□ -2.01
PCP4P48539 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PCP4P48539 AL163540.1-201ENST00000485382 386 ntBASIC2.52□□□□□ -2.01
PCP4P48539 AC107032.1-201ENST00000485945 480 ntBASIC2.52□□□□□ -2.01
PCP4P48539 LSM3P4-201ENST00000502948 309 ntBASIC2.52□□□□□ -2.01
PCP4P48539 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.52□□□□□ -2.01
PCP4P48539 RNU7-4P-201ENST00000516961 62 ntBASIC2.52□□□□□ -2.01
PCP4P48539 Y_RNA.711-201ENST00000516993 102 ntBASIC2.52□□□□□ -2.01
PCP4P48539 SNORA48.11-201ENST00000517015 89 ntBASIC2.52□□□□□ -2.01
PCP4P48539 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.52□□□□□ -2.01
PCP4P48539 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
PCP4P48539 AC090617.3-201ENST00000573670 475 ntBASIC2.52□□□□□ -2.01
PCP4P48539 MIR5695-201ENST00000579717 85 ntBASIC2.52□□□□□ -2.01
PCP4P48539 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC2.52□□□□□ -2.01
PCP4P48539 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.52□□□□□ -2.01
PCP4P48539 AL096712.1-201ENST00000614561 159 ntBASIC2.52□□□□□ -2.01
PCP4P48539 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC2.52□□□□□ -2.01
PCP4P48539 HOTTIP_3.1-201ENST00000619957 337 ntBASIC2.52□□□□□ -2.01
PCP4P48539 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PCP4P48539 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC2.52□□□□□ -2.01
PCP4P48539 AC010325.3-201ENST00000641084 394 ntBASIC2.52□□□□□ -2.01
PCP4P48539 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCP4P48539 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.52□□□□□ -2.01
PCP4P48539 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCP4P48539 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PCP4P48539 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCP4P48539 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
PCP4P48539 Y_RNA.148-201ENST00000363557 117 ntBASIC2.51□□□□□ -2.01
PCP4P48539 RNU6-873P-201ENST00000363833 107 ntBASIC2.51□□□□□ -2.01
PCP4P48539 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC2.51□□□□□ -2.01
PCP4P48539 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PCP4P48539 RNU6-546P-201ENST00000383991 107 ntBASIC2.51□□□□□ -2.01
PCP4P48539 RNA5SP213-201ENST00000391031 106 ntBASIC2.51□□□□□ -2.01
PCP4P48539 MIR1294-201ENST00000408503 142 ntBASIC2.51□□□□□ -2.01
PCP4P48539 Y_RNA.592-201ENST00000410274 109 ntBASIC2.51□□□□□ -2.01
PCP4P48539 AC004866.1-201ENST00000411748 78 ntBASIC2.51□□□□□ -2.01
PCP4P48539 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC2.51□□□□□ -2.01
PCP4P48539 AC114482.1-201ENST00000418010 247 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms