Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.83□□□□□ -2.12
TNFSF9P41273 RNU2-36P-201ENST00000410361 191 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AL353621.1-201ENST00000418219 243 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.83□□□□□ -2.12
TNFSF9P41273 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.83□□□□□ -2.12
TNFSF9P41273 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.83□□□□□ -2.12
TNFSF9P41273 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.83□□□□□ -2.12
TNFSF9P41273 AL591212.2-201ENST00000433923 257 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 EPS15P1-201ENST00000448836 336 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.83□□□□□ -2.12
TNFSF9P41273 AC093899.1-201ENST00000457984 376 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 SNORD97-201ENST00000459187 142 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AC034244.1-201ENST00000507687 207 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AC108729.3-201ENST00000513484 108 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.83□□□□□ -2.12
TNFSF9P41273 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.83□□□□□ -2.12
TNFSF9P41273 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.83□□□□□ -2.12
TNFSF9P41273 ARL2BPP2-201ENST00000550907 489 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.83□□□□□ -2.12
TNFSF9P41273 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.83□□□□□ -2.12
TNFSF9P41273 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.83□□□□□ -2.12
TNFSF9P41273 MIR4448-201ENST00000584360 86 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AL670379.10-201ENST00000604330 253 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AP000860.1-201ENST00000605250 559 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AL670379.9-201ENST00000605428 253 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 TUSC7.1-201ENST00000610969 165 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AP001486.3-201ENST00000615334 372 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AC009159.2-201ENST00000617603 606 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AL031667.3-201ENST00000620124 655 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.83□□□□□ -2.12
TNFSF9P41273 AC138627.2-201ENST00000624202 601 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.83□□□□□ -2.12
TNFSF9P41273 AL359851.1-201ENST00000569460 4997 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
TNFSF9P41273 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TNFSF9P41273 AC092104.1-201ENST00000497346 1441 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TNFSF9P41273 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TNFSF9P41273 RNU6-858P-201ENST00000362436 107 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 SNORA4.3-201ENST00000365564 137 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 RNU2-62P-201ENST00000410868 191 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.82□□□□□ -2.12
TNFSF9P41273 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.82□□□□□ -2.12
TNFSF9P41273 RPL7P34-201ENST00000433316 712 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 AL078601.1-201ENST00000444542 271 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 SSXP1-201ENST00000453640 473 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 MTCO1P42-201ENST00000457379 726 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 AL139824.2-201ENST00000458731 1095 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 SNORD11.1-201ENST00000459482 85 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.82□□□□□ -2.12
TNFSF9P41273 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.82□□□□□ -2.12
TNFSF9P41273 AC107953.1-201ENST00000522216 297 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
TNFSF9P41273 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
TNFSF9P41273 ZNF321P-202ENST00000550843 495 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 MIR4529-201ENST00000578110 78 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 MIR4287-201ENST00000579398 78 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 MIR3618-201ENST00000580330 88 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.82□□□□□ -2.12
TNFSF9P41273 AC022893.3-201ENST00000607665 437 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 AC130324.3-201ENST00000614165 542 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 AC104010.1-201ENST00000616889 150 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 AL162373.1-201ENST00000620433 407 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 FRG1KP-201ENST00000623592 341 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 AP003400.5-201ENST00000624827 617 ntBASIC1.82□□□□□ -2.12
TNFSF9P41273 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
TNFSF9P41273 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
TNFSF9P41273 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TNFSF9P41273 RNA5SP276-201ENST00000362580 94 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 Y_RNA.46-201ENST00000362695 102 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 SMIM11P1-201ENST00000369586 178 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 RNU6-1025P-201ENST00000410629 104 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.81□□□□□ -2.12
TNFSF9P41273 XKRYP1-201ENST00000423438 492 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 HMGN2P38-201ENST00000423806 265 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 XKRYP2-201ENST00000432915 492 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.81□□□□□ -2.12
TNFSF9P41273 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.81□□□□□ -2.12
TNFSF9P41273 PMCHL2-203ENST00000457791 237 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.81□□□□□ -2.12
TNFSF9P41273 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.81□□□□□ -2.12
TNFSF9P41273 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.81□□□□□ -2.12
TNFSF9P41273 RNU6-677P-201ENST00000516914 101 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.81□□□□□ -2.12
TNFSF9P41273 CBX3P4-201ENST00000538909 354 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 AC123904.2-201ENST00000548059 300 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.81□□□□□ -2.12
TNFSF9P41273 PSMA3P-201ENST00000555485 635 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 AC012435.1-202ENST00000568772 240 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.81□□□□□ -2.12
TNFSF9P41273 MIR4307-201ENST00000582802 84 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 VN1R80P-201ENST00000597126 338 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 AC008751.2-201ENST00000597885 980 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 AP001981.2-201ENST00000603241 418 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 AC105148.1-201ENST00000604961 409 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 Z99289.3-201ENST00000605586 594 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 AC087683.2-201ENST00000611384 326 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 AL365204.3-201ENST00000612448 685 ntBASIC1.81□□□□□ -2.12
TNFSF9P41273 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms