Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MTCYBP16-201ENST00000509187 1129 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 RNU6-334P-201ENST00000517072 102 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
COL4A5P29400 AC004908.2-201ENST00000609090 574 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 DUSP12P1-201ENST00000612874 516 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 AC107075.1-201ENST00000613695 314 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 AC006927.2-201ENST00000639256 389 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 Z75746.1-201ENST00000440243 2080 ntBASIC1.11□□□□□ -2.23
COL4A5P29400 RNU6-748P-201ENST00000384648 107 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 RPL21P24-201ENST00000413752 448 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 RPL26P27-201ENST00000414397 437 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.1□□□□□ -2.23
COL4A5P29400 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A5P29400 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A5P29400 GPM6BP2-201ENST00000432046 144 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 MTATP6P30-201ENST00000443540 664 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 GPM6BP1-201ENST00000446387 144 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 KATNBL1P6-201ENST00000453433 915 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AC244505.3-201ENST00000454598 187 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 RNU7-136P-201ENST00000458819 69 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 HMGB1P36-201ENST00000487709 576 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 RPS27AP10-201ENST00000496103 208 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 MTND5P13-201ENST00000513046 1079 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.1□□□□□ -2.23
COL4A5P29400 AL512347.1-201ENST00000566420 503 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AF038458.1-201ENST00000588406 262 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AL109918.3-201ENST00000603072 338 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AC124016.2-201ENST00000610058 665 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AL138478.1-201ENST00000612252 832 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AL773524.1-201ENST00000614065 229 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AC010975.3-201ENST00000618727 978 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.1□□□□□ -2.23
COL4A5P29400 LINC02211-204ENST00000642024 1070 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
COL4A5P29400 AC138393.1-203ENST00000327086 343 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 U3.13-201ENST00000364804 214 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 SNORD65.1-201ENST00000390889 71 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 RNU11-5P-201ENST00000391216 129 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 DHFRP6-201ENST00000401776 268 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A5P29400 UBE2D3P3-201ENST00000426992 425 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 CBX3P6-201ENST00000430257 527 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AL357134.1-201ENST00000445848 426 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 HMGN2P10-201ENST00000448085 265 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A5P29400 KLF3P2-201ENST00000465138 268 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AC008628.1-201ENST00000508663 265 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AC093809.1-201ENST00000509155 340 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AC091965.2-201ENST00000512324 613 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 DEFB131D-201ENST00000526803 184 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AP003497.1-201ENST00000528472 562 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.1□□□□□ -2.23
COL4A5P29400 OR6C7P-201ENST00000547875 934 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AL359212.1-201ENST00000556608 614 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 VN1R87P-201ENST00000596706 487 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 RNU6-91P-201ENST00000607774 107 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AL445264.1-201ENST00000621719 171 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 AC091932.3-201ENST00000624223 323 ntBASIC1.1□□□□□ -2.23
COL4A5P29400 HAUS6P2-201ENST00000433254 2404 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 RNU6-468P-201ENST00000384003 109 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 Y_RNA.548-201ENST00000384656 105 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
COL4A5P29400 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
COL4A5P29400 AL079342.2-201ENST00000403367 482 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 AC093106.2-201ENST00000428212 385 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 GTF2IP3-201ENST00000433887 494 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 JTBP1-201ENST00000441314 247 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 MTCO3P45-201ENST00000443036 613 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 HSPE1P24-201ENST00000450782 238 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.09□□□□□ -2.24
COL4A5P29400 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.09□□□□□ -2.24
COL4A5P29400 AC112771.1-201ENST00000463581 102 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
COL4A5P29400 RNA5SP137-201ENST00000516833 135 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 RNU6-703P-201ENST00000516946 107 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 RNA5SP165-201ENST00000517142 115 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 RN7SKP258-201ENST00000517151 304 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.09□□□□□ -2.24
COL4A5P29400 AC012435.1-202ENST00000568772 240 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 AC087045.1-201ENST00000605856 382 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.09□□□□□ -2.24
COL4A5P29400 AC106052.1-201ENST00000608029 497 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 AC008759.3-201ENST00000613300 508 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
COL4A5P29400 AC024581.2-201ENST00000619986 252 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 AP000943.4-201ENST00000622912 357 ntBASIC1.09□□□□□ -2.24
COL4A5P29400 RNU5B-4P-201ENST00000363508 111 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 RNU6-35P-201ENST00000384530 107 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.08□□□□□ -2.24
COL4A5P29400 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.08□□□□□ -2.24
COL4A5P29400 BX119904.4-201ENST00000424402 301 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 MTND5P14-201ENST00000441481 1267 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A5P29400 PAXBP1P1-201ENST00000449315 447 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms