Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RN7SL303P-201ENST00000469773 251 ntBASIC4.87□□□□□ -1.63
RFX1P22670 MED28P2-201ENST00000475771 317 ntBASIC4.87□□□□□ -1.63
RFX1P22670 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX1P22670 AC091874.1-201ENST00000511402 339 ntBASIC4.87□□□□□ -1.63
RFX1P22670 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.87□□□□□ -1.63
RFX1P22670 AC100770.1-201ENST00000532310 322 ntBASIC4.87□□□□□ -1.63
RFX1P22670 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX1P22670 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX1P22670 MIR5571-201ENST00000577998 113 ntBASIC4.87□□□□□ -1.63
RFX1P22670 Y_RNA.772-201ENST00000606692 102 ntBASIC4.87□□□□□ -1.63
RFX1P22670 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX1P22670 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.87□□□□□ -1.63
RFX1P22670 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.87□□□□□ -1.63
RFX1P22670 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX1P22670 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFX1P22670 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX1P22670 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
RFX1P22670 LINC02555-201ENST00000563933 1951 ntBASIC4.86□□□□□ -1.63
RFX1P22670 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX1P22670 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX1P22670 MIR335-201ENST00000362173 94 ntBASIC4.86□□□□□ -1.63
RFX1P22670 RNU6-1301P-201ENST00000362724 104 ntBASIC4.86□□□□□ -1.63
RFX1P22670 Y_RNA.515-201ENST00000384535 112 ntBASIC4.86□□□□□ -1.63
RFX1P22670 RNU1-139P-201ENST00000391307 165 ntBASIC4.86□□□□□ -1.63
RFX1P22670 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.86□□□□□ -1.63
RFX1P22670 MRPL49P2-201ENST00000521066 465 ntBASIC4.86□□□□□ -1.63
RFX1P22670 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
RFX1P22670 AC136932.1-201ENST00000574771 208 ntBASIC4.86□□□□□ -1.63
RFX1P22670 AL109918.3-201ENST00000603072 338 ntBASIC4.86□□□□□ -1.63
RFX1P22670 HSPE1P7-201ENST00000604681 321 ntBASIC4.86□□□□□ -1.63
RFX1P22670 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.86□□□□□ -1.63
RFX1P22670 AL138880.2-201ENST00000616214 239 ntBASIC4.86□□□□□ -1.63
RFX1P22670 AC073308.1-201ENST00000623696 305 ntBASIC4.86□□□□□ -1.63
RFX1P22670 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX1P22670 SNORA43.4-201ENST00000629559 138 ntBASIC4.86□□□□□ -1.63
RFX1P22670 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX1P22670 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFX1P22670 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX1P22670 AP001148.1-201ENST00000624124 2359 ntBASIC4.86□□□□□ -1.63
RFX1P22670 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX1P22670 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX1P22670 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
RFX1P22670 RAD17P1-201ENST00000418130 2042 ntBASIC4.85□□□□□ -1.63
RFX1P22670 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RFX1P22670 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RFX1P22670 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.85□□□□□ -1.63
RFX1P22670 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX1P22670 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX1P22670 snoU2_19.2-201ENST00000363024 80 ntBASIC4.85□□□□□ -1.63
RFX1P22670 MIR32-201ENST00000384965 70 ntBASIC4.85□□□□□ -1.63
RFX1P22670 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RFX1P22670 RNA5SP146-201ENST00000410743 123 ntBASIC4.85□□□□□ -1.63
RFX1P22670 RNU2-64P-201ENST00000411315 191 ntBASIC4.85□□□□□ -1.63
RFX1P22670 RPS12P10-201ENST00000427031 377 ntBASIC4.85□□□□□ -1.63
RFX1P22670 AC016700.2-201ENST00000446011 156 ntBASIC4.85□□□□□ -1.63
RFX1P22670 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.85□□□□□ -1.63
RFX1P22670 AC087477.1-201ENST00000465747 340 ntBASIC4.85□□□□□ -1.63
RFX1P22670 RPL21P126-201ENST00000470049 478 ntBASIC4.85□□□□□ -1.63
RFX1P22670 RPS29P20-201ENST00000489592 171 ntBASIC4.85□□□□□ -1.63
RFX1P22670 AF186996.7-201ENST00000492781 209 ntBASIC4.85□□□□□ -1.63
RFX1P22670 RPS23P5-201ENST00000495419 428 ntBASIC4.85□□□□□ -1.63
RFX1P22670 HMGB1P35-201ENST00000503360 598 ntBASIC4.85□□□□□ -1.63
RFX1P22670 AC016632.1-201ENST00000503994 196 ntBASIC4.85□□□□□ -1.63
RFX1P22670 SNORA31.6-201ENST00000516241 130 ntBASIC4.85□□□□□ -1.63
RFX1P22670 AC022868.1-201ENST00000517767 391 ntBASIC4.85□□□□□ -1.63
RFX1P22670 RPL23AP97-201ENST00000568955 471 ntBASIC4.85□□□□□ -1.63
RFX1P22670 AC240442.1-201ENST00000616055 283 ntBASIC4.85□□□□□ -1.63
RFX1P22670 MIR376A1-201ENST00000616574 68 ntBASIC4.85□□□□□ -1.63
RFX1P22670 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.85□□□□□ -1.63
RFX1P22670 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RFX1P22670 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX1P22670 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFX1P22670 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.63
RFX1P22670 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFX1P22670 RNU6-222P-201ENST00000362438 107 ntBASIC4.84□□□□□ -1.63
RFX1P22670 Y_RNA.143-201ENST00000363520 106 ntBASIC4.84□□□□□ -1.63
RFX1P22670 SNORA62.3-201ENST00000365110 153 ntBASIC4.84□□□□□ -1.63
RFX1P22670 RNA5SP213-201ENST00000391031 106 ntBASIC4.84□□□□□ -1.63
RFX1P22670 SNORD78.2-201ENST00000391076 69 ntBASIC4.84□□□□□ -1.63
RFX1P22670 RPL23AP82-202ENST00000427528 469 ntBASIC4.84□□□□□ -1.63
RFX1P22670 EIF1P2-201ENST00000428233 350 ntBASIC4.84□□□□□ -1.63
RFX1P22670 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.84□□□□□ -1.63
RFX1P22670 AC004383.1-201ENST00000438135 289 ntBASIC4.84□□□□□ -1.63
RFX1P22670 AC012671.1-201ENST00000451912 203 ntBASIC4.84□□□□□ -1.63
RFX1P22670 AC022795.1-201ENST00000473808 480 ntBASIC4.84□□□□□ -1.63
RFX1P22670 AP001025.1-201ENST00000486139 332 ntBASIC4.84□□□□□ -1.63
RFX1P22670 MIR4300-201ENST00000581016 96 ntBASIC4.84□□□□□ -1.63
RFX1P22670 AL021997.2-201ENST00000615674 271 ntBASIC4.84□□□□□ -1.63
RFX1P22670 AC007546.2-201ENST00000623996 360 ntBASIC4.84□□□□□ -1.63
RFX1P22670 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFX1P22670 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFX1P22670 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFX1P22670 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.83□□□□□ -1.64
RFX1P22670 ADAM3A-203ENST00000461344 2157 ntBASIC4.83□□□□□ -1.64
RFX1P22670 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFX1P22670 RNU6-858P-201ENST00000362436 107 ntBASIC4.83□□□□□ -1.64
RFX1P22670 Y_RNA.20-201ENST00000362479 113 ntBASIC4.83□□□□□ -1.64
RFX1P22670 Y_RNA.416-201ENST00000384014 113 ntBASIC4.83□□□□□ -1.64
RFX1P22670 MRPL35P1-201ENST00000404272 572 ntBASIC4.83□□□□□ -1.64
RFX1P22670 MIR548H3-201ENST00000408771 118 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms