Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL158156.1-201ENST00000422509 473 ntBASIC4.58□□□□□ -1.68
LIG1P18858 SNORA71B-202ENST00000439232 272 ntBASIC4.58□□□□□ -1.68
LIG1P18858 AC074250.1-201ENST00000511117 192 ntBASIC4.58□□□□□ -1.68
LIG1P18858 IGKV2D-19-201ENST00000523346 262 ntBASIC4.58□□□□□ -1.68
LIG1P18858 AL137100.2-201ENST00000555786 315 ntBASIC4.58□□□□□ -1.68
LIG1P18858 AC002545.1-201ENST00000592511 181 ntBASIC4.58□□□□□ -1.68
LIG1P18858 XIST_intron.1-201ENST00000619444 68 ntBASIC4.58□□□□□ -1.68
LIG1P18858 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.58□□□□□ -1.68
LIG1P18858 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.58□□□□□ -1.68
LIG1P18858 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.58□□□□□ -1.68
LIG1P18858 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LIG1P18858 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LIG1P18858 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LIG1P18858 Z75746.1-201ENST00000440243 2080 ntBASIC4.58□□□□□ -1.68
LIG1P18858 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LIG1P18858 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LIG1P18858 UBE3AP2-201ENST00000429033 2259 ntBASIC4.57□□□□□ -1.68
LIG1P18858 AL672296.1-201ENST00000427780 2158 ntBASIC4.57□□□□□ -1.68
LIG1P18858 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LIG1P18858 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LIG1P18858 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
LIG1P18858 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LIG1P18858 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LIG1P18858 MIR372-201ENST00000362225 67 ntBASIC4.57□□□□□ -1.68
LIG1P18858 Y_RNA.84-201ENST00000363011 104 ntBASIC4.57□□□□□ -1.68
LIG1P18858 Y_RNA.539-201ENST00000384635 107 ntBASIC4.57□□□□□ -1.68
LIG1P18858 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LIG1P18858 SNORD58.1-201ENST00000391313 66 ntBASIC4.57□□□□□ -1.68
LIG1P18858 MIR1193-201ENST00000408109 78 ntBASIC4.57□□□□□ -1.68
LIG1P18858 RNU6-1025P-201ENST00000410629 104 ntBASIC4.57□□□□□ -1.68
LIG1P18858 RHEBP3-201ENST00000411920 351 ntBASIC4.57□□□□□ -1.68
LIG1P18858 PIGPP3-201ENST00000425307 415 ntBASIC4.57□□□□□ -1.68
LIG1P18858 MYL8P-204ENST00000431574 518 ntBASIC4.57□□□□□ -1.68
LIG1P18858 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
LIG1P18858 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.57□□□□□ -1.68
LIG1P18858 SNORA31.6-201ENST00000516241 130 ntBASIC4.57□□□□□ -1.68
LIG1P18858 RNU5B-3P-201ENST00000516601 115 ntBASIC4.57□□□□□ -1.68
LIG1P18858 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.57□□□□□ -1.68
LIG1P18858 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.57□□□□□ -1.68
LIG1P18858 AC006077.1-201ENST00000604746 343 ntBASIC4.57□□□□□ -1.68
LIG1P18858 MIR6867-201ENST00000610636 67 ntBASIC4.57□□□□□ -1.68
LIG1P18858 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.57□□□□□ -1.68
LIG1P18858 AC112484.5-201ENST00000624189 228 ntBASIC4.57□□□□□ -1.68
LIG1P18858 AL365440.1-201ENST00000436135 2167 ntBASIC4.57□□□□□ -1.68
LIG1P18858 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.57□□□□□ -1.68
LIG1P18858 IPO8P1-201ENST00000455509 3109 ntBASIC4.57□□□□□ -1.68
LIG1P18858 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.57□□□□□ -1.68
LIG1P18858 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LIG1P18858 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LIG1P18858 AC116096.1-201ENST00000566804 2314 ntBASIC4.56□□□□□ -1.68
LIG1P18858 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.56□□□□□ -1.68
LIG1P18858 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
LIG1P18858 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LIG1P18858 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
LIG1P18858 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.56□□□□□ -1.68
LIG1P18858 RNU6-50P-201ENST00000362356 103 ntBASIC4.56□□□□□ -1.68
LIG1P18858 RNU6-708P-201ENST00000384217 107 ntBASIC4.56□□□□□ -1.68
LIG1P18858 Y_RNA.458-201ENST00000384240 102 ntBASIC4.56□□□□□ -1.68
LIG1P18858 MIR514A1-201ENST00000385133 98 ntBASIC4.56□□□□□ -1.68
LIG1P18858 MTCYBP2-201ENST00000407745 171 ntBASIC4.56□□□□□ -1.68
LIG1P18858 Z98941.1-201ENST00000407764 100 ntBASIC4.56□□□□□ -1.68
LIG1P18858 RNA5SP494-201ENST00000410653 129 ntBASIC4.56□□□□□ -1.68
LIG1P18858 RNU6-628P-201ENST00000410675 107 ntBASIC4.56□□□□□ -1.68
LIG1P18858 AC096920.1-201ENST00000423991 241 ntBASIC4.56□□□□□ -1.68
LIG1P18858 U3.44-201ENST00000458938 192 ntBASIC4.56□□□□□ -1.68
LIG1P18858 AC098869.1-201ENST00000481627 292 ntBASIC4.56□□□□□ -1.68
LIG1P18858 RN7SL604P-201ENST00000492589 296 ntBASIC4.56□□□□□ -1.68
LIG1P18858 RPL29P14-201ENST00000495837 428 ntBASIC4.56□□□□□ -1.68
LIG1P18858 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.56□□□□□ -1.68
LIG1P18858 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.56□□□□□ -1.68
LIG1P18858 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.56□□□□□ -1.68
LIG1P18858 AC067942.3-201ENST00000512025 362 ntBASIC4.56□□□□□ -1.68
LIG1P18858 AC026402.1-201ENST00000513642 170 ntBASIC4.56□□□□□ -1.68
LIG1P18858 RNU6-789P-201ENST00000517105 102 ntBASIC4.56□□□□□ -1.68
LIG1P18858 SNORA31.20-201ENST00000517111 133 ntBASIC4.56□□□□□ -1.68
LIG1P18858 MIR2116-201ENST00000517221 80 ntBASIC4.56□□□□□ -1.68
LIG1P18858 SNORA81.3-201ENST00000517283 198 ntBASIC4.56□□□□□ -1.68
LIG1P18858 AC091144.1-201ENST00000519573 138 ntBASIC4.56□□□□□ -1.68
LIG1P18858 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.56□□□□□ -1.68
LIG1P18858 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.56□□□□□ -1.68
LIG1P18858 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.56□□□□□ -1.68
LIG1P18858 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.56□□□□□ -1.68
LIG1P18858 AC009318.2-201ENST00000610917 651 ntBASIC4.56□□□□□ -1.68
LIG1P18858 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LIG1P18858 AF117829.1-206ENST00000621883 3802 ntBASIC4.55□□□□□ -1.68
LIG1P18858 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LIG1P18858 AC004925.1-201ENST00000624256 2706 ntBASIC4.55□□□□□ -1.68
LIG1P18858 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LIG1P18858 RLIMP1-201ENST00000339626 1680 ntBASIC4.55□□□□□ -1.68
LIG1P18858 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LIG1P18858 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LIG1P18858 SNORD50.1-201ENST00000362987 71 ntBASIC4.55□□□□□ -1.68
LIG1P18858 Y_RNA.180-201ENST00000363867 113 ntBASIC4.55□□□□□ -1.68
LIG1P18858 RNU6-827P-201ENST00000365553 106 ntBASIC4.55□□□□□ -1.68
LIG1P18858 RNU6-338P-201ENST00000383888 105 ntBASIC4.55□□□□□ -1.68
LIG1P18858 RNU1-13P-201ENST00000384499 162 ntBASIC4.55□□□□□ -1.68
LIG1P18858 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LIG1P18858 RPL21P65-201ENST00000406094 466 ntBASIC4.55□□□□□ -1.68
LIG1P18858 AL117339.3-201ENST00000418733 162 ntBASIC4.55□□□□□ -1.68
LIG1P18858 SDAD1P3-201ENST00000427380 333 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms