Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DOBP13765 HMGB1P9-201ENST00000429856 646 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DOBP13765 AC107399.1-201ENST00000451226 265 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DOBP13765 RNU1-103P-201ENST00000516502 125 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 RNU6-1332P-201ENST00000516666 104 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 RNU6-928P-201ENST00000516876 104 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 COPS8P3-201ENST00000526024 482 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DOBP13765 H3F3AP1-201ENST00000559984 334 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 AC007151.1-201ENST00000572774 483 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 AL355375.2-201ENST00000574825 175 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 MIR4790-201ENST00000577799 79 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DOBP13765 HSPE1P7-201ENST00000604681 321 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 AC113139.1-201ENST00000605049 239 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.74□□□□□ -1.97
HLA-DOBP13765 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DOBP13765 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
HLA-DOBP13765 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DOBP13765 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DOBP13765 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DOBP13765 RNU4-79P-201ENST00000362764 141 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 RNU6-270P-201ENST00000364131 105 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 Y_RNA.384-201ENST00000383909 102 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 Y_RNA.535-201ENST00000384612 99 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 RN7SKP158-201ENST00000410453 326 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 NDUFS5P4-201ENST00000412983 318 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 AL353729.1-201ENST00000425044 720 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 MTND1P17-201ENST00000448961 204 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 SSXP4-201ENST00000451349 245 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 AC233279.1-201ENST00000455300 423 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 Y_RNA.635-201ENST00000459041 101 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 RN7SL807P-201ENST00000470923 297 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 AP005639.2-201ENST00000527592 928 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 AC025423.5-201ENST00000550230 219 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 MIR5004-201ENST00000579078 107 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 MIR4719-201ENST00000585233 84 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 OR1M4P-201ENST00000589199 287 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 AP000787.2-201ENST00000604432 568 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 AC012468.1-201ENST00000604888 430 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 RNU6-85P-201ENST00000605989 107 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DOBP13765 AC068831.7-201ENST00000616954 363 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 PLCE1P1-201ENST00000622094 305 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 AC073308.1-201ENST00000623696 305 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 MTND5P7-201ENST00000413558 1798 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DOBP13765 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DOBP13765 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DOBP13765 MTND5P1-201ENST00000445440 1375 ntBASIC2.73□□□□□ -1.97
HLA-DOBP13765 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DOBP13765 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DOBP13765 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DOBP13765 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DOBP13765 AC138393.1-203ENST00000327086 343 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 AC073325.2-201ENST00000339545 159 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 RNU6-884P-201ENST00000363889 107 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 Y_RNA.387-201ENST00000383918 102 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 SNORA54-201ENST00000384281 123 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 RNU6-658P-201ENST00000384606 106 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 RPL21P3-201ENST00000395517 478 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 AL356057.2-201ENST00000403318 432 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 MIR548F5-201ENST00000408421 86 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DOBP13765 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.72□□□□□ -1.97
HLA-DOBP13765 AL096701.2-201ENST00000416920 238 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 AC099548.1-201ENST00000421443 426 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 RPL7P37-201ENST00000425095 738 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 UBE2V1P4-201ENST00000425374 344 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 SKA2P1-201ENST00000425592 390 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DOBP13765 UQCRHP3-201ENST00000451503 251 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 AC146507.2-201ENST00000460608 476 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 RN7SL75P-201ENST00000461926 281 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 AC104472.2-201ENST00000469035 601 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 AC006445.1-201ENST00000491925 405 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 MTND5P5-201ENST00000503764 376 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 RNU6-1183P-201ENST00000517054 60 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DOBP13765 AP005597.4-201ENST00000526762 229 ntBASIC2.72□□□□□ -1.97
HLA-DOBP13765 GLYCAM1-201ENST00000546596 285 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms