Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC104435.1-201ENST00000483483 166 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC140059.1-201ENST00000489238 361 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 HMGB1P30-201ENST00000492455 606 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 CKS1BP2-201ENST00000497342 240 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC104806.1-201ENST00000508720 308 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC008526.1-201ENST00000509149 338 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 CBX3P7-201ENST00000532876 502 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC007834.2-201ENST00000536310 343 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AL158211.1-201ENST00000566763 763 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 RPS15AP11-201ENST00000594193 385 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 BNIP3P30-201ENST00000601184 574 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC245014.2-201ENST00000603689 287 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC121247.2-201ENST00000604776 136 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AL138963.2-201ENST00000605137 226 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC246785.4-201ENST00000605374 287 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC096772.1-201ENST00000609146 564 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC009831.4-201ENST00000620744 325 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 AC078883.4-201ENST00000623218 367 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 IGHVIII-44-202ENST00000636235 289 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 U6.114-201ENST00000636407 96 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 MTND5P17-201ENST00000418405 1603 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 RBBP8P1-201ENST00000449447 1844 ntBASIC1.8□□□□□ -2.12
IGHV3-43DP0DP04 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 OR56A5-201ENST00000340110 738 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 SNORA62.1-201ENST00000364287 154 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 SNORA67.1-201ENST00000364749 141 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 SNORD115-7-201ENST00000365306 82 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 RPS4XP7-201ENST00000406274 780 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 RNU6-248P-201ENST00000410720 107 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 RNU2-63P-201ENST00000410792 194 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 BX295541.1-201ENST00000417774 250 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 MTCYBP5-201ENST00000423752 1135 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 CETN4P-201ENST00000432407 469 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 CALM1P1-201ENST00000442082 433 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 AC073901.1-201ENST00000462471 408 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 AC090515.1-201ENST00000465295 476 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 RPL7P43-201ENST00000478876 753 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 RPL37P25-201ENST00000507308 276 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 AF213884.2-201ENST00000510417 903 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 Y_RNA.687-201ENST00000516558 91 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 AC026407.1-201ENST00000518369 204 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 OR4R1P-201ENST00000529879 463 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 MTCYBP33-201ENST00000575007 1130 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 MIR5692A1-201ENST00000580523 69 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 AC008088.1-201ENST00000580993 280 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 AL590229.1-201ENST00000603497 542 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 SNORD14A-201ENST00000606526 91 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 AC093788.1-201ENST00000609356 927 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 AC073114.1-201ENST00000612027 490 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 AC009233.1-201ENST00000616477 371 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 MIR6132-201ENST00000622083 109 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 MIR6873-201ENST00000622788 63 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 MIR3529-201ENST00000637713 78 ntBASIC1.79□□□□□ -2.12
IGHV3-43DP0DP04 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 RNU1-72P-201ENST00000362976 153 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 RNU6-942P-201ENST00000363002 107 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 SNORD114-19-201ENST00000363072 75 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 RNU6-371P-201ENST00000364283 108 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 RNU6-384P-201ENST00000364900 104 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 RNU6-108P-201ENST00000365558 107 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 RNU6-116P-201ENST00000384042 109 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 SNORA80E-201ENST00000384744 137 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 RNU4-53P-201ENST00000410828 140 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 RN7SKP142-201ENST00000411236 328 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 PGBD4P6-201ENST00000421501 610 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 EIF4EP4-201ENST00000424916 578 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 TOMM20P4-201ENST00000427861 435 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 AC000111.3-201ENST00000433478 193 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 AC244505.5-201ENST00000443639 207 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 MTND1P27-201ENST00000451117 902 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 HMGB3P3-201ENST00000510526 400 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 AC091965.2-201ENST00000512324 613 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 AP003072.2-201ENST00000527756 676 ntBASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.78□□□□□ -2.12
IGHV3-43DP0DP04 OSBPL9P5-201ENST00000542581 171 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 273.7 ms