Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.33□□□□□ -2.2
TPM3P06753 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TPM3P06753 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.33□□□□□ -2.2
TPM3P06753 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.33□□□□□ -2.2
TPM3P06753 AL132657.2-201ENST00000564417 358 ntBASIC1.33□□□□□ -2.2
TPM3P06753 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.33□□□□□ -2.2
TPM3P06753 BNIP3P9-201ENST00000603714 553 ntBASIC1.33□□□□□ -2.2
TPM3P06753 RPL21P136-201ENST00000605378 396 ntBASIC1.33□□□□□ -2.2
TPM3P06753 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.33□□□□□ -2.2
TPM3P06753 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TPM3P06753 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TPM3P06753 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TPM3P06753 AL589826.1-201ENST00000340697 249 ntBASIC1.32□□□□□ -2.2
TPM3P06753 RNU6-529P-201ENST00000363383 104 ntBASIC1.32□□□□□ -2.2
TPM3P06753 RNU6-1284P-201ENST00000363701 100 ntBASIC1.32□□□□□ -2.2
TPM3P06753 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.32□□□□□ -2.2
TPM3P06753 SNORA40C-201ENST00000391285 128 ntBASIC1.32□□□□□ -2.2
TPM3P06753 USP9YP18-201ENST00000425912 695 ntBASIC1.32□□□□□ -2.2
TPM3P06753 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.32□□□□□ -2.2
TPM3P06753 SNORD97-201ENST00000459187 142 ntBASIC1.32□□□□□ -2.2
TPM3P06753 MED28P2-201ENST00000475771 317 ntBASIC1.32□□□□□ -2.2
TPM3P06753 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.32□□□□□ -2.2
TPM3P06753 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.32□□□□□ -2.2
TPM3P06753 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.32□□□□□ -2.2
TPM3P06753 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
TPM3P06753 AC097468.3-201ENST00000607956 456 ntBASIC1.32□□□□□ -2.2
TPM3P06753 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.32□□□□□ -2.2
TPM3P06753 AC009269.6-201ENST00000621778 588 ntBASIC1.32□□□□□ -2.2
TPM3P06753 AL163152.1-201ENST00000642001 374 ntBASIC1.32□□□□□ -2.2
TPM3P06753 HAUS6P2-201ENST00000433254 2404 ntBASIC1.32□□□□□ -2.2
TPM3P06753 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
TPM3P06753 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.32□□□□□ -2.2
TPM3P06753 AC092125.1-201ENST00000562568 1995 ntBASIC1.32□□□□□ -2.2
TPM3P06753 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.32□□□□□ -2.2
TPM3P06753 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
TPM3P06753 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TPM3P06753 Y_RNA.99-201ENST00000363138 105 ntBASIC1.31□□□□□ -2.2
TPM3P06753 SNORD14B-201ENST00000364533 90 ntBASIC1.31□□□□□ -2.2
TPM3P06753 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.31□□□□□ -2.2
TPM3P06753 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.31□□□□□ -2.2
TPM3P06753 NCOR1P3-201ENST00000420479 303 ntBASIC1.31□□□□□ -2.2
TPM3P06753 USP9YP35-201ENST00000435696 412 ntBASIC1.31□□□□□ -2.2
TPM3P06753 MTCO1P44-201ENST00000441935 243 ntBASIC1.31□□□□□ -2.2
TPM3P06753 SNORA31.17-201ENST00000516953 127 ntBASIC1.31□□□□□ -2.2
TPM3P06753 RN7SKP256-201ENST00000517201 314 ntBASIC1.31□□□□□ -2.2
TPM3P06753 AC018630.3-201ENST00000542637 96 ntBASIC1.31□□□□□ -2.2
TPM3P06753 RPL21P5-201ENST00000554662 472 ntBASIC1.31□□□□□ -2.2
TPM3P06753 VN1R83P-201ENST00000595685 445 ntBASIC1.31□□□□□ -2.2
TPM3P06753 AC012065.4-201ENST00000602445 679 ntBASIC1.31□□□□□ -2.2
TPM3P06753 AL358072.1-201ENST00000604156 575 ntBASIC1.31□□□□□ -2.2
TPM3P06753 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.31□□□□□ -2.2
TPM3P06753 AC093648.1-201ENST00000623546 606 ntBASIC1.31□□□□□ -2.2
TPM3P06753 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.31□□□□□ -2.2
TPM3P06753 MTND5P33-201ENST00000571250 1450 ntBASIC1.31□□□□□ -2.2
TPM3P06753 RNU6-271P-201ENST00000363858 105 ntBASIC1.3□□□□□ -2.2
TPM3P06753 RNU6-944P-201ENST00000364023 107 ntBASIC1.3□□□□□ -2.2
TPM3P06753 SNORA25.8-201ENST00000364831 128 ntBASIC1.3□□□□□ -2.2
TPM3P06753 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
TPM3P06753 RNU6-166P-201ENST00000384371 107 ntBASIC1.3□□□□□ -2.2
TPM3P06753 RNU6-817P-201ENST00000391083 104 ntBASIC1.3□□□□□ -2.2
TPM3P06753 RPL37P10-201ENST00000412884 288 ntBASIC1.3□□□□□ -2.2
TPM3P06753 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.3□□□□□ -2.2
TPM3P06753 AL035666.1-201ENST00000446195 348 ntBASIC1.3□□□□□ -2.2
TPM3P06753 OR2A41P-201ENST00000473586 105 ntBASIC1.3□□□□□ -2.2
TPM3P06753 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.3□□□□□ -2.2
TPM3P06753 AC010409.1-201ENST00000487382 476 ntBASIC1.3□□□□□ -2.2
TPM3P06753 AC019288.1-201ENST00000557918 224 ntBASIC1.3□□□□□ -2.2
TPM3P06753 AC027807.1-201ENST00000559921 996 ntBASIC1.3□□□□□ -2.2
TPM3P06753 AC002400.1-201ENST00000569310 726 ntBASIC1.3□□□□□ -2.2
TPM3P06753 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.3□□□□□ -2.2
TPM3P06753 AC073413.2-201ENST00000604332 360 ntBASIC1.3□□□□□ -2.2
TPM3P06753 BNIP3P19-201ENST00000605397 577 ntBASIC1.3□□□□□ -2.2
TPM3P06753 AC104985.3-201ENST00000623479 597 ntBASIC1.3□□□□□ -2.2
TPM3P06753 MIR3529-201ENST00000637713 78 ntBASIC1.3□□□□□ -2.2
TPM3P06753 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
TPM3P06753 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TPM3P06753 RNU6-858P-201ENST00000362436 107 ntBASIC1.29□□□□□ -2.2
TPM3P06753 RNU6-655P-201ENST00000362858 107 ntBASIC1.29□□□□□ -2.2
TPM3P06753 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM3P06753 RAC1P6-201ENST00000423911 575 ntBASIC1.29□□□□□ -2.2
TPM3P06753 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM3P06753 CR769776.1-201ENST00000441254 787 ntBASIC1.29□□□□□ -2.2
TPM3P06753 PAXBP1P1-201ENST00000449315 447 ntBASIC1.29□□□□□ -2.2
TPM3P06753 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM3P06753 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM3P06753 RPS3AP4-201ENST00000555161 764 ntBASIC1.29□□□□□ -2.2
TPM3P06753 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM3P06753 AC005668.1-201ENST00000571142 476 ntBASIC1.29□□□□□ -2.2
TPM3P06753 AC136618.2-201ENST00000575091 400 ntBASIC1.29□□□□□ -2.2
TPM3P06753 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.29□□□□□ -2.2
TPM3P06753 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.29□□□□□ -2.2
TPM3P06753 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM3P06753 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM3P06753 AC092656.1-203ENST00000624134 423 ntBASIC1.29□□□□□ -2.2
TPM3P06753 AL136313.1-201ENST00000624804 202 ntBASIC1.29□□□□□ -2.2
TPM3P06753 AP000560.1-201ENST00000624150 1937 ntBASIC1.28□□□□□ -2.2
TPM3P06753 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
TPM3P06753 RNU6-777P-201ENST00000364265 104 ntBASIC1.28□□□□□ -2.2
TPM3P06753 RNU4-91P-201ENST00000364778 135 ntBASIC1.28□□□□□ -2.2
TPM3P06753 RNU6-487P-201ENST00000365430 104 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 833.9 ms