Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 PRELID3BP1-201ENST00000457142 540 ntBASIC1.89□□□□□ -2.11
SNX4O95219 AC008834.1-201ENST00000511612 175 ntBASIC1.89□□□□□ -2.11
SNX4O95219 AC117532.1-201ENST00000514638 323 ntBASIC1.89□□□□□ -2.11
SNX4O95219 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.89□□□□□ -2.11
SNX4O95219 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.89□□□□□ -2.11
SNX4O95219 AP003392.2-201ENST00000527269 208 ntBASIC1.89□□□□□ -2.11
SNX4O95219 AC022616.8-201ENST00000533569 253 ntBASIC1.89□□□□□ -2.11
SNX4O95219 AC025678.1-201ENST00000567861 338 ntBASIC1.89□□□□□ -2.11
SNX4O95219 MIR4509-3-201ENST00000578671 94 ntBASIC1.89□□□□□ -2.11
SNX4O95219 MIR4509-2-201ENST00000583920 94 ntBASIC1.89□□□□□ -2.11
SNX4O95219 AC103710.2-201ENST00000609912 942 ntBASIC1.89□□□□□ -2.11
SNX4O95219 MIR4509-1-201ENST00000618224 94 ntBASIC1.89□□□□□ -2.11
SNX4O95219 AC006338.1-201ENST00000618453 749 ntBASIC1.89□□□□□ -2.11
SNX4O95219 AL356266.1-201ENST00000623311 483 ntBASIC1.89□□□□□ -2.11
SNX4O95219 AP002371.2-201ENST00000624450 503 ntBASIC1.89□□□□□ -2.11
SNX4O95219 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.89□□□□□ -2.11
SNX4O95219 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SNX4O95219 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.89□□□□□ -2.11
SNX4O95219 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.88□□□□□ -2.11
SNX4O95219 SNORD114-1-201ENST00000362705 72 ntBASIC1.88□□□□□ -2.11
SNX4O95219 RNU6-942P-201ENST00000363002 107 ntBASIC1.88□□□□□ -2.11
SNX4O95219 RNU6-1210P-201ENST00000363775 107 ntBASIC1.88□□□□□ -2.11
SNX4O95219 RNU6-622P-201ENST00000384272 103 ntBASIC1.88□□□□□ -2.11
SNX4O95219 RNU6-1274P-201ENST00000384557 107 ntBASIC1.88□□□□□ -2.11
SNX4O95219 CBX3P9-201ENST00000402326 552 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AL023284.1-201ENST00000403956 276 ntBASIC1.88□□□□□ -2.11
SNX4O95219 MIR1261-201ENST00000408659 82 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.88□□□□□ -2.11
SNX4O95219 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.88□□□□□ -2.11
SNX4O95219 AC092809.3-201ENST00000415453 231 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AC092648.1-201ENST00000425870 423 ntBASIC1.88□□□□□ -2.11
SNX4O95219 USP9YP18-201ENST00000425912 695 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AL365400.1-201ENST00000431854 640 ntBASIC1.88□□□□□ -2.11
SNX4O95219 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.88□□□□□ -2.11
SNX4O95219 AL121890.1-201ENST00000435457 205 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AL451074.3-201ENST00000437709 472 ntBASIC1.88□□□□□ -2.11
SNX4O95219 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.88□□□□□ -2.11
SNX4O95219 AL008629.1-201ENST00000438615 184 ntBASIC1.88□□□□□ -2.11
SNX4O95219 SSXP1-201ENST00000453640 473 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.88□□□□□ -2.11
SNX4O95219 snoU13.15-201ENST00000459407 104 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AL121594.1-201ENST00000475906 575 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AC027575.1-201ENST00000481064 460 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.88□□□□□ -2.11
SNX4O95219 AC119751.4-201ENST00000507498 357 ntBASIC1.88□□□□□ -2.11
SNX4O95219 PTP4A1P4-201ENST00000512479 322 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.88□□□□□ -2.11
SNX4O95219 Y_RNA.689-201ENST00000516589 107 ntBASIC1.88□□□□□ -2.11
SNX4O95219 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
SNX4O95219 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.88□□□□□ -2.11
SNX4O95219 AP000873.5-201ENST00000533906 236 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AC135279.1-201ENST00000543493 504 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.88□□□□□ -2.11
SNX4O95219 AL359547.2-201ENST00000615810 418 ntBASIC1.88□□□□□ -2.11
SNX4O95219 U6.42-201ENST00000618440 107 ntBASIC1.88□□□□□ -2.11
SNX4O95219 AC092192.1-201ENST00000633154 1018 ntBASIC1.88□□□□□ -2.11
SNX4O95219 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SNX4O95219 RNU6-72P-201ENST00000384285 79 ntBASIC1.87□□□□□ -2.11
SNX4O95219 MIR29B2-201ENST00000385055 81 ntBASIC1.87□□□□□ -2.11
SNX4O95219 RNA5SP390-201ENST00000410191 113 ntBASIC1.87□□□□□ -2.11
SNX4O95219 MTCO2P21-201ENST00000419780 677 ntBASIC1.87□□□□□ -2.11
SNX4O95219 BX510359.4-201ENST00000423750 193 ntBASIC1.87□□□□□ -2.11
SNX4O95219 RPL23AP30-201ENST00000432419 501 ntBASIC1.87□□□□□ -2.11
SNX4O95219 AC084290.1-201ENST00000434995 374 ntBASIC1.87□□□□□ -2.11
SNX4O95219 snoU13.26-201ENST00000459452 105 ntBASIC1.87□□□□□ -2.11
SNX4O95219 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.87□□□□□ -2.11
SNX4O95219 YWHAEP4-201ENST00000505390 198 ntBASIC1.87□□□□□ -2.11
SNX4O95219 CBX3P4-201ENST00000538909 354 ntBASIC1.87□□□□□ -2.11
SNX4O95219 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.87□□□□□ -2.11
SNX4O95219 AC123904.2-201ENST00000548059 300 ntBASIC1.87□□□□□ -2.11
SNX4O95219 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.87□□□□□ -2.11
SNX4O95219 AL049838.1-201ENST00000563647 981 ntBASIC1.87□□□□□ -2.11
SNX4O95219 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.87□□□□□ -2.11
SNX4O95219 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.87□□□□□ -2.11
SNX4O95219 AL138889.2-201ENST00000603883 242 ntBASIC1.87□□□□□ -2.11
SNX4O95219 CYP2C61P-201ENST00000604072 290 ntBASIC1.87□□□□□ -2.11
SNX4O95219 AC108747.1-201ENST00000609508 535 ntBASIC1.87□□□□□ -2.11
SNX4O95219 AL132822.1-201ENST00000617063 513 ntBASIC1.87□□□□□ -2.11
SNX4O95219 SCARNA4-202ENST00000625402 129 ntBASIC1.87□□□□□ -2.11
SNX4O95219 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.87□□□□□ -2.11
SNX4O95219 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SNX4O95219 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
SNX4O95219 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SNX4O95219 MIR934-201ENST00000401241 83 ntBASIC1.86□□□□□ -2.11
SNX4O95219 AL079342.1-201ENST00000401460 267 ntBASIC1.86□□□□□ -2.11
SNX4O95219 AC019129.1-201ENST00000403786 261 ntBASIC1.86□□□□□ -2.11
SNX4O95219 AL355143.1-201ENST00000407101 841 ntBASIC1.86□□□□□ -2.11
SNX4O95219 MIR1262-201ENST00000408276 93 ntBASIC1.86□□□□□ -2.11
SNX4O95219 RNU6-1140P-201ENST00000410517 106 ntBASIC1.86□□□□□ -2.11
SNX4O95219 RNU2-23P-201ENST00000410545 195 ntBASIC1.86□□□□□ -2.11
SNX4O95219 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.86□□□□□ -2.11
SNX4O95219 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.86□□□□□ -2.11
SNX4O95219 HSPE1P21-201ENST00000438283 308 ntBASIC1.86□□□□□ -2.11
SNX4O95219 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.86□□□□□ -2.11
SNX4O95219 snoU13.14-201ENST00000459372 104 ntBASIC1.86□□□□□ -2.11
SNX4O95219 RPL21P99-201ENST00000480369 423 ntBASIC1.86□□□□□ -2.11
SNX4O95219 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.86□□□□□ -2.11
SNX4O95219 AC018630.3-201ENST00000542637 96 ntBASIC1.86□□□□□ -2.11
SNX4O95219 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.86□□□□□ -2.11
SNX4O95219 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms