Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC022418.1-201ENST00000624118 445 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AP003400.5-201ENST00000624827 617 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AC138915.1-201ENST00000565427 1685 ntBASIC2.52□□□□□ -2.01
SNX3O60493 AC000403.1-201ENST00000613696 3585 ntBASIC2.52□□□□□ -2.01
SNX3O60493 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.52□□□□□ -2.01
SNX3O60493 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNX3O60493 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
SNX3O60493 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNX3O60493 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SNX3O60493 RNU6-942P-201ENST00000363002 107 ntBASIC2.51□□□□□ -2.01
SNX3O60493 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.51□□□□□ -2.01
SNX3O60493 RNA5SP267-201ENST00000364893 126 ntBASIC2.51□□□□□ -2.01
SNX3O60493 RNU6-483P-201ENST00000384088 108 ntBASIC2.51□□□□□ -2.01
SNX3O60493 Y_RNA.554-201ENST00000384672 102 ntBASIC2.51□□□□□ -2.01
SNX3O60493 AL138827.1-201ENST00000402666 306 ntBASIC2.51□□□□□ -2.01
SNX3O60493 AL590002.1-201ENST00000406554 418 ntBASIC2.51□□□□□ -2.01
SNX3O60493 AL513475.1-201ENST00000406602 315 ntBASIC2.51□□□□□ -2.01
SNX3O60493 AL606923.1-201ENST00000406616 190 ntBASIC2.51□□□□□ -2.01
SNX3O60493 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX3O60493 RNA5SP492-201ENST00000411330 114 ntBASIC2.51□□□□□ -2.01
SNX3O60493 AF274854.1-201ENST00000413236 615 ntBASIC2.51□□□□□ -2.01
SNX3O60493 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX3O60493 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.51□□□□□ -2.01
SNX3O60493 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX3O60493 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX3O60493 AC092017.2-201ENST00000427600 362 ntBASIC2.51□□□□□ -2.01
SNX3O60493 CALM1P1-201ENST00000442082 433 ntBASIC2.51□□□□□ -2.01
SNX3O60493 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX3O60493 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX3O60493 RPL23AP70-201ENST00000483361 460 ntBASIC2.51□□□□□ -2.01
SNX3O60493 MRPL42P6-201ENST00000486397 371 ntBASIC2.51□□□□□ -2.01
SNX3O60493 RN7SL504P-201ENST00000494496 287 ntBASIC2.51□□□□□ -2.01
SNX3O60493 AC082651.2-201ENST00000496833 166 ntBASIC2.51□□□□□ -2.01
SNX3O60493 CCDC34P1-201ENST00000507441 517 ntBASIC2.51□□□□□ -2.01
SNX3O60493 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX3O60493 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.51□□□□□ -2.01
SNX3O60493 SCARNA11.3-201ENST00000517276 130 ntBASIC2.51□□□□□ -2.01
SNX3O60493 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX3O60493 OR5AQ1P-201ENST00000527596 927 ntBASIC2.51□□□□□ -2.01
SNX3O60493 HSPE1P20-201ENST00000538133 289 ntBASIC2.51□□□□□ -2.01
SNX3O60493 TPRKBP2-201ENST00000565969 475 ntBASIC2.51□□□□□ -2.01
SNX3O60493 MIR4424-201ENST00000585257 86 ntBASIC2.51□□□□□ -2.01
SNX3O60493 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX3O60493 AC098679.4-201ENST00000624241 654 ntBASIC2.51□□□□□ -2.01
SNX3O60493 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNX3O60493 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.51□□□□□ -2.01
SNX3O60493 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
SNX3O60493 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX3O60493 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNX3O60493 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNX3O60493 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
SNX3O60493 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNX3O60493 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNX3O60493 MIR7-3-201ENST00000384898 110 ntBASIC2.5□□□□□ -2.01
SNX3O60493 MIR147B-201ENST00000390185 80 ntBASIC2.5□□□□□ -2.01
SNX3O60493 SNORD37.1-201ENST00000390968 65 ntBASIC2.5□□□□□ -2.01
SNX3O60493 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNX3O60493 RNU6-648P-201ENST00000410190 107 ntBASIC2.5□□□□□ -2.01
SNX3O60493 RNA5SP21-201ENST00000410917 96 ntBASIC2.5□□□□□ -2.01
SNX3O60493 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.5□□□□□ -2.01
SNX3O60493 RPS15AP7-201ENST00000439294 405 ntBASIC2.5□□□□□ -2.01
SNX3O60493 HIGD1AP2-201ENST00000446367 280 ntBASIC2.5□□□□□ -2.01
SNX3O60493 VN1R34P-201ENST00000447387 883 ntBASIC2.5□□□□□ -2.01
SNX3O60493 AP001324.2-201ENST00000461163 319 ntBASIC2.5□□□□□ -2.01
SNX3O60493 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.5□□□□□ -2.01
SNX3O60493 MTAPP1-201ENST00000489154 819 ntBASIC2.5□□□□□ -2.01
SNX3O60493 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.5□□□□□ -2.01
SNX3O60493 AC114781.4-201ENST00000513707 639 ntBASIC2.5□□□□□ -2.01
SNX3O60493 BTF3P12-201ENST00000519620 469 ntBASIC2.5□□□□□ -2.01
SNX3O60493 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.5□□□□□ -2.01
SNX3O60493 MTND4P7-201ENST00000523876 130 ntBASIC2.5□□□□□ -2.01
SNX3O60493 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.5□□□□□ -2.01
SNX3O60493 AL512310.1-201ENST00000548639 172 ntBASIC2.5□□□□□ -2.01
SNX3O60493 AC078814.3-201ENST00000553036 491 ntBASIC2.5□□□□□ -2.01
SNX3O60493 MTCO3P23-201ENST00000561363 289 ntBASIC2.5□□□□□ -2.01
SNX3O60493 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.5□□□□□ -2.01
SNX3O60493 MIR4444-1-201ENST00000581696 74 ntBASIC2.5□□□□□ -2.01
SNX3O60493 MIR4444-2-201ENST00000584390 74 ntBASIC2.5□□□□□ -2.01
SNX3O60493 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNX3O60493 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.5□□□□□ -2.01
SNX3O60493 AC068790.6-201ENST00000602558 258 ntBASIC2.5□□□□□ -2.01
SNX3O60493 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.5□□□□□ -2.01
SNX3O60493 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNX3O60493 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNX3O60493 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SNX3O60493 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SNX3O60493 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
SNX3O60493 RNU6-858P-201ENST00000362436 107 ntBASIC2.49□□□□□ -2.01
SNX3O60493 RNU1-112P-201ENST00000364401 164 ntBASIC2.49□□□□□ -2.01
SNX3O60493 RNA5SP72-201ENST00000364442 117 ntBASIC2.49□□□□□ -2.01
SNX3O60493 Y_RNA.324-201ENST00000365165 102 ntBASIC2.49□□□□□ -2.01
SNX3O60493 SET-203ENST00000372688 801 ntTSL 2 BASIC2.49□□□□□ -2.01
SNX3O60493 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SNX3O60493 Y_RNA.399-201ENST00000383955 105 ntBASIC2.49□□□□□ -2.01
SNX3O60493 RNU6-1083P-201ENST00000384022 107 ntBASIC2.49□□□□□ -2.01
SNX3O60493 RNU6-748P-201ENST00000384648 107 ntBASIC2.49□□□□□ -2.01
SNX3O60493 MIR181A1-201ENST00000385026 110 ntBASIC2.49□□□□□ -2.01
SNX3O60493 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.49□□□□□ -2.01
SNX3O60493 RNA5SP120-201ENST00000410900 112 ntBASIC2.49□□□□□ -2.01
SNX3O60493 AC022018.1-201ENST00000430685 241 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms