Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC005261.5-201ENST00000596280 355 ntBASIC2.72□□□□□ -1.97
PRKNO60260 AL031601.2-202ENST00000622650 282 ntBASIC2.72□□□□□ -1.97
PRKNO60260 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.72□□□□□ -1.97
PRKNO60260 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.72□□□□□ -1.97
PRKNO60260 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PRKNO60260 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PRKNO60260 AL035425.3-201ENST00000564206 4996 ntBASIC2.72□□□□□ -1.97
PRKNO60260 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PRKNO60260 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PRKNO60260 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.71□□□□□ -1.98
PRKNO60260 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.71□□□□□ -1.98
PRKNO60260 FAM35BP-202ENST00000497389 3337 ntBASIC2.71□□□□□ -1.98
PRKNO60260 RNU6-797P-201ENST00000363101 109 ntBASIC2.71□□□□□ -1.98
PRKNO60260 Y_RNA.166-201ENST00000363730 102 ntBASIC2.71□□□□□ -1.98
PRKNO60260 SNORD113-7-201ENST00000363762 77 ntBASIC2.71□□□□□ -1.98
PRKNO60260 RNU6-266P-201ENST00000364225 107 ntBASIC2.71□□□□□ -1.98
PRKNO60260 Y_RNA.263-201ENST00000364659 114 ntBASIC2.71□□□□□ -1.98
PRKNO60260 RNA5SP274-201ENST00000410484 108 ntBASIC2.71□□□□□ -1.98
PRKNO60260 RNU2-41P-201ENST00000410991 178 ntBASIC2.71□□□□□ -1.98
PRKNO60260 MTND3P23-201ENST00000431980 347 ntBASIC2.71□□□□□ -1.98
PRKNO60260 NDUFA5P4-201ENST00000436704 385 ntBASIC2.71□□□□□ -1.98
PRKNO60260 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.71□□□□□ -1.98
PRKNO60260 AC091179.1-201ENST00000461606 579 ntBASIC2.71□□□□□ -1.98
PRKNO60260 AC117503.1-201ENST00000472241 394 ntBASIC2.71□□□□□ -1.98
PRKNO60260 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.71□□□□□ -1.98
PRKNO60260 RPS26P21-201ENST00000475397 348 ntBASIC2.71□□□□□ -1.98
PRKNO60260 AC006483.1-201ENST00000487308 313 ntBASIC2.71□□□□□ -1.98
PRKNO60260 AC096576.1-201ENST00000489014 359 ntBASIC2.71□□□□□ -1.98
PRKNO60260 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.71□□□□□ -1.98
PRKNO60260 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.71□□□□□ -1.98
PRKNO60260 SNORA31.1-201ENST00000515993 133 ntBASIC2.71□□□□□ -1.98
PRKNO60260 SNORA31.5-201ENST00000516190 133 ntBASIC2.71□□□□□ -1.98
PRKNO60260 MIR3941-201ENST00000582572 103 ntBASIC2.71□□□□□ -1.98
PRKNO60260 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.71□□□□□ -1.98
PRKNO60260 AC243960.4-201ENST00000600532 288 ntBASIC2.71□□□□□ -1.98
PRKNO60260 AC008962.1-201ENST00000605729 304 ntBASIC2.71□□□□□ -1.98
PRKNO60260 FTX_3.1-201ENST00000610451 147 ntBASIC2.71□□□□□ -1.98
PRKNO60260 AC006111.3-201ENST00000622137 383 ntBASIC2.71□□□□□ -1.98
PRKNO60260 AL133216.2-202ENST00000634512 349 ntBASIC2.71□□□□□ -1.98
PRKNO60260 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PRKNO60260 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.71□□□□□ -1.98
PRKNO60260 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.7□□□□□ -1.98
PRKNO60260 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PRKNO60260 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRKNO60260 AC073544.1-201ENST00000600110 1595 ntBASIC2.7□□□□□ -1.98
PRKNO60260 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
PRKNO60260 AC093831.2-201ENST00000624393 3427 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AL359693.1-201ENST00000614959 2407 ntBASIC2.7□□□□□ -1.98
PRKNO60260 RNU6-254P-201ENST00000363377 107 ntBASIC2.7□□□□□ -1.98
PRKNO60260 Y_RNA.184-201ENST00000363884 108 ntBASIC2.7□□□□□ -1.98
PRKNO60260 SNORA80A-201ENST00000363922 136 ntBASIC2.7□□□□□ -1.98
PRKNO60260 RNU6-805P-201ENST00000365643 106 ntBASIC2.7□□□□□ -1.98
PRKNO60260 Y_RNA.529-201ENST00000384586 119 ntBASIC2.7□□□□□ -1.98
PRKNO60260 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
PRKNO60260 RNA5SP293-201ENST00000410527 113 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AL353621.1-201ENST00000418219 243 ntBASIC2.7□□□□□ -1.98
PRKNO60260 COTL1P1-201ENST00000422309 375 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AC007560.1-201ENST00000426912 237 ntBASIC2.7□□□□□ -1.98
PRKNO60260 MYL8P-204ENST00000431574 518 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.7□□□□□ -1.98
PRKNO60260 AC107083.1-201ENST00000439643 279 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AL135938.1-201ENST00000443141 297 ntBASIC2.7□□□□□ -1.98
PRKNO60260 UQCRHP3-201ENST00000451503 251 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AL583843.1-201ENST00000456070 346 ntBASIC2.7□□□□□ -1.98
PRKNO60260 RPS27P29-201ENST00000463110 252 ntBASIC2.7□□□□□ -1.98
PRKNO60260 RPL7P43-201ENST00000478876 753 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AL049873.1-201ENST00000480540 376 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.7□□□□□ -1.98
PRKNO60260 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
PRKNO60260 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.7□□□□□ -1.98
PRKNO60260 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.7□□□□□ -1.98
PRKNO60260 RNU1-86P-201ENST00000516108 154 ntBASIC2.7□□□□□ -1.98
PRKNO60260 RNU6-864P-201ENST00000516256 108 ntBASIC2.7□□□□□ -1.98
PRKNO60260 RNU1-107P-201ENST00000516617 154 ntBASIC2.7□□□□□ -1.98
PRKNO60260 RNU6-572P-201ENST00000516724 80 ntBASIC2.7□□□□□ -1.98
PRKNO60260 SNORA31.19-201ENST00000517079 126 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AC245166.1-201ENST00000521012 253 ntBASIC2.7□□□□□ -1.98
PRKNO60260 RNU6-323P-201ENST00000521915 107 ntBASIC2.7□□□□□ -1.98
PRKNO60260 LARP7P3-201ENST00000579888 337 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.7□□□□□ -1.98
PRKNO60260 AL133393.1-201ENST00000603277 287 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AC107294.3-201ENST00000609211 526 ntBASIC2.7□□□□□ -1.98
PRKNO60260 uc_338.5-201ENST00000611839 155 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AC002076.2-201ENST00000617362 122 ntBASIC2.7□□□□□ -1.98
PRKNO60260 RMST_7.1-201ENST00000621935 268 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AC093908.1-201ENST00000623125 8092 ntBASIC2.7□□□□□ -1.98
PRKNO60260 TPTEP1-208ENST00000636884 213 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AC112487.2-201ENST00000637950 304 ntBASIC2.7□□□□□ -1.98
PRKNO60260 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
PRKNO60260 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRKNO60260 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRKNO60260 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.7□□□□□ -1.98
PRKNO60260 AP003122.5-201ENST00000527668 3766 ntBASIC2.7□□□□□ -1.98
PRKNO60260 AL161431.1-201ENST00000618966 4205 ntBASIC2.69□□□□□ -1.98
PRKNO60260 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.69□□□□□ -1.98
PRKNO60260 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PRKNO60260 AC009487.2-201ENST00000420969 6821 ntBASIC2.69□□□□□ -1.98
PRKNO60260 MTND5P27-201ENST00000428871 1720 ntBASIC2.69□□□□□ -1.98
PRKNO60260 MIR412-201ENST00000362142 91 ntBASIC2.69□□□□□ -1.98
PRKNO60260 SNORA14A-201ENST00000364773 135 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms