Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.41□□□□□ -2.18
SGCEO43556 RNU6-276P-201ENST00000516114 96 ntBASIC1.41□□□□□ -2.18
SGCEO43556 RNU6-677P-201ENST00000516914 101 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.41□□□□□ -2.18
SGCEO43556 AP003392.2-201ENST00000527269 208 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AC022616.8-201ENST00000533569 253 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.41□□□□□ -2.18
SGCEO43556 AL157871.3-201ENST00000557231 293 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AC174048.1-201ENST00000603389 144 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AL670379.2-201ENST00000604983 252 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AL670379.4-201ENST00000605279 254 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AC072039.2-201ENST00000608883 439 ntBASIC1.41□□□□□ -2.18
SGCEO43556 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AL132822.1-201ENST00000617063 513 ntBASIC1.41□□□□□ -2.18
SGCEO43556 AC091965.5-201ENST00000624785 342 ntBASIC1.41□□□□□ -2.18
SGCEO43556 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SGCEO43556 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.41□□□□□ -2.18
SGCEO43556 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.4□□□□□ -2.19
SGCEO43556 SNORA4.3-201ENST00000365564 137 ntBASIC1.4□□□□□ -2.19
SGCEO43556 RNU6-395P-201ENST00000365662 106 ntBASIC1.4□□□□□ -2.19
SGCEO43556 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SGCEO43556 Y_RNA.465-201ENST00000384293 102 ntBASIC1.4□□□□□ -2.19
SGCEO43556 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
SGCEO43556 RNA5SP501-201ENST00000410990 112 ntBASIC1.4□□□□□ -2.19
SGCEO43556 AL358453.1-201ENST00000422522 250 ntBASIC1.4□□□□□ -2.19
SGCEO43556 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.4□□□□□ -2.19
SGCEO43556 AL445669.1-201ENST00000426743 755 ntBASIC1.4□□□□□ -2.19
SGCEO43556 AL121890.1-201ENST00000435457 205 ntBASIC1.4□□□□□ -2.19
SGCEO43556 TIMM9P1-201ENST00000436122 256 ntBASIC1.4□□□□□ -2.19
SGCEO43556 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.4□□□□□ -2.19
SGCEO43556 SSXP1-201ENST00000453640 473 ntBASIC1.4□□□□□ -2.19
SGCEO43556 MTND2P31-201ENST00000512602 616 ntBASIC1.4□□□□□ -2.19
SGCEO43556 EEF1A1P37-201ENST00000522748 715 ntBASIC1.4□□□□□ -2.19
SGCEO43556 AP005660.1-201ENST00000522972 293 ntBASIC1.4□□□□□ -2.19
SGCEO43556 AP005435.4-201ENST00000529514 284 ntBASIC1.4□□□□□ -2.19
SGCEO43556 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.4□□□□□ -2.19
SGCEO43556 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.4□□□□□ -2.19
SGCEO43556 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.4□□□□□ -2.19
SGCEO43556 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.4□□□□□ -2.19
SGCEO43556 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SGCEO43556 BNIP3P27-201ENST00000599991 412 ntBASIC1.4□□□□□ -2.19
SGCEO43556 BNIP3P30-201ENST00000601184 574 ntBASIC1.4□□□□□ -2.19
SGCEO43556 CLIC4P2-201ENST00000601934 717 ntBASIC1.4□□□□□ -2.19
SGCEO43556 KC877982.1-201ENST00000602313 470 ntBASIC1.4□□□□□ -2.19
SGCEO43556 AC016925.2-201ENST00000605108 242 ntBASIC1.4□□□□□ -2.19
SGCEO43556 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.4□□□□□ -2.19
SGCEO43556 AC022893.3-201ENST00000607665 437 ntBASIC1.4□□□□□ -2.19
SGCEO43556 RMST_6.1-201ENST00000611980 203 ntBASIC1.4□□□□□ -2.19
SGCEO43556 AL589994.2-201ENST00000621124 579 ntBASIC1.4□□□□□ -2.19
SGCEO43556 AC093648.1-201ENST00000623546 606 ntBASIC1.4□□□□□ -2.19
SGCEO43556 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.4□□□□□ -2.19
SGCEO43556 AC099786.3-201ENST00000565735 1410 ntBASIC1.4□□□□□ -2.19
SGCEO43556 FARSBP1-201ENST00000435808 1778 ntBASIC1.39□□□□□ -2.19
SGCEO43556 RNU6-655P-201ENST00000362858 107 ntBASIC1.39□□□□□ -2.19
SGCEO43556 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SGCEO43556 RNU6-1274P-201ENST00000384557 107 ntBASIC1.39□□□□□ -2.19
SGCEO43556 RNU2-62P-201ENST00000410868 191 ntBASIC1.39□□□□□ -2.19
SGCEO43556 UBE2V1P10-201ENST00000414685 269 ntBASIC1.39□□□□□ -2.19
SGCEO43556 ELOCP17-201ENST00000414751 326 ntBASIC1.39□□□□□ -2.19
SGCEO43556 ELOCP9-201ENST00000418624 239 ntBASIC1.39□□□□□ -2.19
SGCEO43556 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.39□□□□□ -2.19
SGCEO43556 USP9YP18-201ENST00000425912 695 ntBASIC1.39□□□□□ -2.19
SGCEO43556 TXNL1P1-201ENST00000429528 554 ntBASIC1.39□□□□□ -2.19
SGCEO43556 MTCO3P5-201ENST00000433620 714 ntBASIC1.39□□□□□ -2.19
SGCEO43556 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.39□□□□□ -2.19
SGCEO43556 HSPE1P24-201ENST00000450782 238 ntBASIC1.39□□□□□ -2.19
SGCEO43556 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.39□□□□□ -2.19
SGCEO43556 RNU6-914P-201ENST00000516749 109 ntBASIC1.39□□□□□ -2.19
SGCEO43556 RN7SKP256-201ENST00000517201 314 ntBASIC1.39□□□□□ -2.19
SGCEO43556 AC068587.4-201ENST00000533893 186 ntBASIC1.39□□□□□ -2.19
SGCEO43556 CR383656.8-201ENST00000549046 145 ntBASIC1.39□□□□□ -2.19
SGCEO43556 AC027807.1-201ENST00000559921 996 ntBASIC1.39□□□□□ -2.19
SGCEO43556 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.39□□□□□ -2.19
SGCEO43556 MIR3683-201ENST00000580847 82 ntBASIC1.39□□□□□ -2.19
SGCEO43556 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.39□□□□□ -2.19
SGCEO43556 AC097468.3-201ENST00000607956 456 ntBASIC1.39□□□□□ -2.19
SGCEO43556 AL355472.4-201ENST00000610233 626 ntBASIC1.39□□□□□ -2.19
SGCEO43556 AC068944.2-201ENST00000610373 403 ntBASIC1.39□□□□□ -2.19
SGCEO43556 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SGCEO43556 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.39□□□□□ -2.19
SGCEO43556 ZNF680P1-201ENST00000436625 1469 ntBASIC1.38□□□□□ -2.19
SGCEO43556 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
SGCEO43556 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SGCEO43556 Y_RNA.192-201ENST00000363977 102 ntBASIC1.38□□□□□ -2.19
SGCEO43556 RNU6-1164P-201ENST00000364428 107 ntBASIC1.38□□□□□ -2.19
SGCEO43556 MIR597-201ENST00000384968 97 ntBASIC1.38□□□□□ -2.19
SGCEO43556 FCF1P10-201ENST00000407590 479 ntBASIC1.38□□□□□ -2.19
SGCEO43556 AC074117.2-201ENST00000417130 397 ntBASIC1.38□□□□□ -2.19
SGCEO43556 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.38□□□□□ -2.19
SGCEO43556 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.38□□□□□ -2.19
SGCEO43556 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.38□□□□□ -2.19
SGCEO43556 HMGN2P23-201ENST00000456759 269 ntBASIC1.38□□□□□ -2.19
SGCEO43556 AL139824.2-201ENST00000458731 1095 ntBASIC1.38□□□□□ -2.19
SGCEO43556 FO393415.2-201ENST00000480085 343 ntBASIC1.38□□□□□ -2.19
SGCEO43556 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.38□□□□□ -2.19
SGCEO43556 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.38□□□□□ -2.19
SGCEO43556 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.38□□□□□ -2.19
SGCEO43556 AC135279.1-201ENST00000543493 504 ntBASIC1.38□□□□□ -2.19
SGCEO43556 AC092325.1-201ENST00000566449 554 ntBASIC1.38□□□□□ -2.19
SGCEO43556 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms