Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 HMGB3P8-201ENST00000449709 577 ntBASIC3.46□□□□□ -1.86
PROM1O43490 PCMTD1P1-201ENST00000455560 355 ntBASIC3.46□□□□□ -1.86
PROM1O43490 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.46□□□□□ -1.86
PROM1O43490 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.46□□□□□ -1.86
PROM1O43490 SNORA25.10-201ENST00000515926 124 ntBASIC3.46□□□□□ -1.86
PROM1O43490 RNU6-120P-201ENST00000516077 103 ntBASIC3.46□□□□□ -1.86
PROM1O43490 RNU6-307P-201ENST00000516743 106 ntBASIC3.46□□□□□ -1.86
PROM1O43490 SNORD59.2-201ENST00000516873 68 ntBASIC3.46□□□□□ -1.86
PROM1O43490 RNA5SP290-201ENST00000517133 127 ntBASIC3.46□□□□□ -1.86
PROM1O43490 RNU6-264P-201ENST00000517134 104 ntBASIC3.46□□□□□ -1.86
PROM1O43490 MIR4680-201ENST00000580906 66 ntBASIC3.46□□□□□ -1.86
PROM1O43490 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.46□□□□□ -1.86
PROM1O43490 KLKP1-201ENST00000595979 403 ntBASIC3.46□□□□□ -1.86
PROM1O43490 AC006111.3-201ENST00000622137 383 ntBASIC3.46□□□□□ -1.86
PROM1O43490 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PROM1O43490 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PROM1O43490 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
PROM1O43490 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PROM1O43490 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PROM1O43490 RNU6-490P-201ENST00000362985 107 ntBASIC3.45□□□□□ -1.86
PROM1O43490 Y_RNA.158-201ENST00000363651 101 ntBASIC3.45□□□□□ -1.86
PROM1O43490 RNA5SP72-201ENST00000364442 117 ntBASIC3.45□□□□□ -1.86
PROM1O43490 RNU6-1032P-201ENST00000384100 107 ntBASIC3.45□□□□□ -1.86
PROM1O43490 MIR1290-201ENST00000408735 78 ntBASIC3.45□□□□□ -1.86
PROM1O43490 RNU2-3P-201ENST00000410144 191 ntBASIC3.45□□□□□ -1.86
PROM1O43490 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.45□□□□□ -1.86
PROM1O43490 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.45□□□□□ -1.86
PROM1O43490 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.45□□□□□ -1.86
PROM1O43490 HMGN2P31-201ENST00000432430 273 ntBASIC3.45□□□□□ -1.86
PROM1O43490 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.45□□□□□ -1.86
PROM1O43490 RPL21P23-201ENST00000446654 460 ntBASIC3.45□□□□□ -1.86
PROM1O43490 AC006539.3-201ENST00000454258 129 ntBASIC3.45□□□□□ -1.86
PROM1O43490 BTF3P15-201ENST00000455606 336 ntBASIC3.45□□□□□ -1.86
PROM1O43490 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.45□□□□□ -1.86
PROM1O43490 RPS20P22-201ENST00000473700 357 ntBASIC3.45□□□□□ -1.86
PROM1O43490 AL135752.1-201ENST00000479477 471 ntBASIC3.45□□□□□ -1.86
PROM1O43490 AL160314.1-201ENST00000490836 438 ntBASIC3.45□□□□□ -1.86
PROM1O43490 RNU1-86P-201ENST00000516108 154 ntBASIC3.45□□□□□ -1.86
PROM1O43490 MIR892C-201ENST00000516410 77 ntBASIC3.45□□□□□ -1.86
PROM1O43490 RNU1-107P-201ENST00000516617 154 ntBASIC3.45□□□□□ -1.86
PROM1O43490 TRAV37-201ENST00000553906 342 ntBASIC3.45□□□□□ -1.86
PROM1O43490 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.45□□□□□ -1.86
PROM1O43490 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.45□□□□□ -1.86
PROM1O43490 AC109446.1-201ENST00000566172 220 ntBASIC3.45□□□□□ -1.86
PROM1O43490 MIR3671-201ENST00000580455 88 ntBASIC3.45□□□□□ -1.86
PROM1O43490 AL121655.1-201ENST00000605811 308 ntBASIC3.45□□□□□ -1.86
PROM1O43490 MIR6076-201ENST00000617521 113 ntBASIC3.45□□□□□ -1.86
PROM1O43490 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.45□□□□□ -1.86
PROM1O43490 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PROM1O43490 AC093010.3-201ENST00000570269 15214 ntBASIC3.45□□□□□ -1.86
PROM1O43490 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
PROM1O43490 AL079305.1-201ENST00000623159 3008 ntBASIC3.44□□□□□ -1.86
PROM1O43490 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PROM1O43490 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.44□□□□□ -1.86
PROM1O43490 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PROM1O43490 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PROM1O43490 Y_RNA.252-201ENST00000364556 101 ntBASIC3.44□□□□□ -1.86
PROM1O43490 Y_RNA.428-201ENST00000384078 102 ntBASIC3.44□□□□□ -1.86
PROM1O43490 RNU6-574P-201ENST00000384265 107 ntBASIC3.44□□□□□ -1.86
PROM1O43490 RNU6-196P-201ENST00000384315 107 ntBASIC3.44□□□□□ -1.86
PROM1O43490 RNY1P14-201ENST00000384426 108 ntBASIC3.44□□□□□ -1.86
PROM1O43490 Y_RNA.527-201ENST00000384573 102 ntBASIC3.44□□□□□ -1.86
PROM1O43490 SNORA1.3-201ENST00000384676 136 ntBASIC3.44□□□□□ -1.86
PROM1O43490 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.44□□□□□ -1.86
PROM1O43490 PIGFP3-201ENST00000441918 722 ntBASIC3.44□□□□□ -1.86
PROM1O43490 RPS24P13-201ENST00000442520 397 ntBASIC3.44□□□□□ -1.86
PROM1O43490 FTH1P25-201ENST00000447665 469 ntBASIC3.44□□□□□ -1.86
PROM1O43490 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.44□□□□□ -1.86
PROM1O43490 AC008571.1-201ENST00000467232 300 ntBASIC3.44□□□□□ -1.86
PROM1O43490 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.44□□□□□ -1.86
PROM1O43490 SNORA31.1-201ENST00000515993 133 ntBASIC3.44□□□□□ -1.86
PROM1O43490 SNORA31.5-201ENST00000516190 133 ntBASIC3.44□□□□□ -1.86
PROM1O43490 RNU6-711P-201ENST00000517255 106 ntBASIC3.44□□□□□ -1.86
PROM1O43490 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PROM1O43490 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.44□□□□□ -1.86
PROM1O43490 AP003122.3-201ENST00000526316 255 ntBASIC3.44□□□□□ -1.86
PROM1O43490 ATP5F1P5-201ENST00000526403 760 ntBASIC3.44□□□□□ -1.86
PROM1O43490 AC084851.1-201ENST00000529105 249 ntBASIC3.44□□□□□ -1.86
PROM1O43490 AC023442.1-201ENST00000531247 422 ntBASIC3.44□□□□□ -1.86
PROM1O43490 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.44□□□□□ -1.86
PROM1O43490 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.44□□□□□ -1.86
PROM1O43490 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.44□□□□□ -1.86
PROM1O43490 AC005899.2-201ENST00000584353 90 ntBASIC3.44□□□□□ -1.86
PROM1O43490 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PROM1O43490 AC106900.2-201ENST00000604994 317 ntBASIC3.44□□□□□ -1.86
PROM1O43490 AC123912.5-201ENST00000605470 343 ntBASIC3.44□□□□□ -1.86
PROM1O43490 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.44□□□□□ -1.86
PROM1O43490 AL132822.1-201ENST00000617063 513 ntBASIC3.44□□□□□ -1.86
PROM1O43490 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.44□□□□□ -1.86
PROM1O43490 7SK.10-201ENST00000621414 298 ntBASIC3.44□□□□□ -1.86
PROM1O43490 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.44□□□□□ -1.86
PROM1O43490 CDC27P3-201ENST00000635418 1910 ntBASIC3.44□□□□□ -1.86
PROM1O43490 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PROM1O43490 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.44□□□□□ -1.86
PROM1O43490 PWAR6-201ENST00000552334 4618 ntBASIC3.43□□□□□ -1.86
PROM1O43490 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PROM1O43490 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PROM1O43490 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PROM1O43490 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
PROM1O43490 Y_RNA.133-201ENST00000363428 110 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms