Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC108078.2-201ENST00000510750 236 ntBASIC2.14□□□□□ -2.07
MSH4O15457 SNORA25.11-201ENST00000515935 105 ntBASIC2.14□□□□□ -2.07
MSH4O15457 FAM92A1P1-201ENST00000528023 890 ntBASIC2.14□□□□□ -2.07
MSH4O15457 ADI1P3-201ENST00000549509 470 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AC121758.2-201ENST00000553271 193 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AC109446.2-201ENST00000567872 497 ntBASIC2.14□□□□□ -2.07
MSH4O15457 MIR3915-201ENST00000578518 97 ntBASIC2.14□□□□□ -2.07
MSH4O15457 BNIP3P8-201ENST00000597863 560 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AC126118.1-201ENST00000607744 628 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AC091304.9-201ENST00000612091 226 ntBASIC2.14□□□□□ -2.07
MSH4O15457 AC012409.4-201ENST00000612923 249 ntBASIC2.14□□□□□ -2.07
MSH4O15457 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.14□□□□□ -2.07
MSH4O15457 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
MSH4O15457 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MSH4O15457 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MSH4O15457 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.13□□□□□ -2.07
MSH4O15457 RNY1P12-201ENST00000364251 105 ntBASIC2.13□□□□□ -2.07
MSH4O15457 RNA5SP125-201ENST00000364843 120 ntBASIC2.13□□□□□ -2.07
MSH4O15457 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MSH4O15457 SNORA75B-201ENST00000384053 137 ntBASIC2.13□□□□□ -2.07
MSH4O15457 RNU1-52P-201ENST00000384190 164 ntBASIC2.13□□□□□ -2.07
MSH4O15457 MIR558-201ENST00000384920 94 ntBASIC2.13□□□□□ -2.07
MSH4O15457 RNU2-39P-201ENST00000410604 198 ntBASIC2.13□□□□□ -2.07
MSH4O15457 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.13□□□□□ -2.07
MSH4O15457 CYCSP48-201ENST00000417124 323 ntBASIC2.13□□□□□ -2.07
MSH4O15457 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.13□□□□□ -2.07
MSH4O15457 MED13P1-201ENST00000428342 171 ntBASIC2.13□□□□□ -2.07
MSH4O15457 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.13□□□□□ -2.07
MSH4O15457 RPS15AP9-201ENST00000439856 381 ntBASIC2.13□□□□□ -2.07
MSH4O15457 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.13□□□□□ -2.07
MSH4O15457 snoU13.23-201ENST00000458863 104 ntBASIC2.13□□□□□ -2.07
MSH4O15457 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.13□□□□□ -2.07
MSH4O15457 DYNLL1P5-201ENST00000467158 270 ntBASIC2.13□□□□□ -2.07
MSH4O15457 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.13□□□□□ -2.07
MSH4O15457 RPL36AP48-201ENST00000485521 314 ntBASIC2.13□□□□□ -2.07
MSH4O15457 RPL22P13-201ENST00000493291 347 ntBASIC2.13□□□□□ -2.07
MSH4O15457 AC117522.1-201ENST00000509821 380 ntBASIC2.13□□□□□ -2.07
MSH4O15457 RNA5SP182-201ENST00000516064 82 ntBASIC2.13□□□□□ -2.07
MSH4O15457 RNU6-123P-201ENST00000516163 102 ntBASIC2.13□□□□□ -2.07
MSH4O15457 AC022616.3-201ENST00000523940 148 ntBASIC2.13□□□□□ -2.07
MSH4O15457 AC012213.3-201ENST00000577199 777 ntBASIC2.13□□□□□ -2.07
MSH4O15457 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.13□□□□□ -2.07
MSH4O15457 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.13□□□□□ -2.07
MSH4O15457 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MSH4O15457 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.13□□□□□ -2.07
MSH4O15457 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MSH4O15457 AC009487.4-201ENST00000624969 3585 ntBASIC2.13□□□□□ -2.07
MSH4O15457 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.12□□□□□ -2.07
MSH4O15457 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
MSH4O15457 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.12□□□□□ -2.07
MSH4O15457 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
MSH4O15457 SNORA20.2-201ENST00000383922 131 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AL133475.1-201ENST00000404414 305 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AC127391.1-201ENST00000411737 98 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.12□□□□□ -2.07
MSH4O15457 MORF4L1P6-201ENST00000418771 268 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.12□□□□□ -2.07
MSH4O15457 AL445685.2-201ENST00000422551 342 ntBASIC2.12□□□□□ -2.07
MSH4O15457 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.12□□□□□ -2.07
MSH4O15457 AC104850.1-201ENST00000435940 476 ntBASIC2.12□□□□□ -2.07
MSH4O15457 MTND6P13-201ENST00000443510 523 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AC011753.1-201ENST00000451001 220 ntBASIC2.12□□□□□ -2.07
MSH4O15457 SNRPFP4-201ENST00000456366 242 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.12□□□□□ -2.07
MSH4O15457 RAP1BP2-201ENST00000478270 544 ntBASIC2.12□□□□□ -2.07
MSH4O15457 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.12□□□□□ -2.07
MSH4O15457 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.12□□□□□ -2.07
MSH4O15457 SMURF2P1-201ENST00000514992 481 ntBASIC2.12□□□□□ -2.07
MSH4O15457 RNU2-46P-201ENST00000517038 113 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
MSH4O15457 MIR4769-201ENST00000584126 77 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AC005771.1-201ENST00000585581 349 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AL022154.1-201ENST00000604698 785 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AL139286.2-201ENST00000606838 396 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AC005332.10-201ENST00000612725 619 ntBASIC2.12□□□□□ -2.07
MSH4O15457 MIR6845-201ENST00000613182 61 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AL133173.2-201ENST00000614270 90 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AL603755.1-201ENST00000619504 163 ntBASIC2.12□□□□□ -2.07
MSH4O15457 AP000770.2-201ENST00000623694 100 ntBASIC2.12□□□□□ -2.07
MSH4O15457 Z75746.1-201ENST00000440243 2080 ntBASIC2.12□□□□□ -2.07
MSH4O15457 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
MSH4O15457 AC103710.2-202ENST00000641454 2853 ntBASIC2.12□□□□□ -2.07
MSH4O15457 RNY4P34-201ENST00000364779 95 ntBASIC2.11□□□□□ -2.07
MSH4O15457 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
MSH4O15457 SNORA24.1-201ENST00000384401 135 ntBASIC2.11□□□□□ -2.07
MSH4O15457 SNORA40.18-201ENST00000391200 128 ntBASIC2.11□□□□□ -2.07
MSH4O15457 CISD1P1-201ENST00000393907 327 ntBASIC2.11□□□□□ -2.07
MSH4O15457 MIR1302-8-201ENST00000408342 128 ntBASIC2.11□□□□□ -2.07
MSH4O15457 AC016831.2-201ENST00000417179 352 ntBASIC2.11□□□□□ -2.07
MSH4O15457 AC097463.2-201ENST00000421074 142 ntBASIC2.11□□□□□ -2.07
MSH4O15457 AL160275.3-201ENST00000423876 471 ntBASIC2.11□□□□□ -2.07
MSH4O15457 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.11□□□□□ -2.07
MSH4O15457 PGBD4P3-201ENST00000440731 581 ntBASIC2.11□□□□□ -2.07
MSH4O15457 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.11□□□□□ -2.07
MSH4O15457 IFNA11P-201ENST00000446352 526 ntBASIC2.11□□□□□ -2.07
MSH4O15457 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.11□□□□□ -2.07
MSH4O15457 MRPL42P6-201ENST00000486397 371 ntBASIC2.11□□□□□ -2.07
MSH4O15457 AC022493.1-201ENST00000492984 337 ntBASIC2.11□□□□□ -2.07
MSH4O15457 AC116337.1-201ENST00000509680 687 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms