Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 IGKV3-31-201ENST00000523109 329 ntBASIC2.39□□□□□ -2.03
DDX39AO00148 CYCSP26-201ENST00000534107 320 ntBASIC2.39□□□□□ -2.03
DDX39AO00148 MIR4760-201ENST00000585040 80 ntBASIC2.39□□□□□ -2.03
DDX39AO00148 AC009977.1-201ENST00000586015 570 ntBASIC2.39□□□□□ -2.03
DDX39AO00148 AL713866.2-201ENST00000603579 219 ntBASIC2.39□□□□□ -2.03
DDX39AO00148 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.39□□□□□ -2.03
DDX39AO00148 SCARNA4-202ENST00000625402 129 ntBASIC2.39□□□□□ -2.03
DDX39AO00148 AC110994.2-201ENST00000635481 492 ntBASIC2.39□□□□□ -2.03
DDX39AO00148 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
DDX39AO00148 MTND4P4-201ENST00000439033 1366 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.38□□□□□ -2.03
DDX39AO00148 HAUS6P2-201ENST00000433254 2404 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
DDX39AO00148 RNU6-553P-201ENST00000364047 96 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 RNU5A-2P-201ENST00000384337 116 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 RNU6-843P-201ENST00000384454 104 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 RNU1-57P-201ENST00000384491 166 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 RNU6-1179P-201ENST00000384667 107 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 AL079342.1-201ENST00000401460 267 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 AL031577.2-201ENST00000404133 280 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 RNA5SP111-201ENST00000411386 101 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.38□□□□□ -2.03
DDX39AO00148 AL118520.1-201ENST00000450770 291 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.38□□□□□ -2.03
DDX39AO00148 SNORA48.11-201ENST00000517015 89 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.38□□□□□ -2.03
DDX39AO00148 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.38□□□□□ -2.03
DDX39AO00148 RANP3-201ENST00000530970 276 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 AC087241.2-201ENST00000535801 324 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 BNIP3P8-201ENST00000597863 560 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 AC012065.4-201ENST00000602445 679 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 AC021646.1-201ENST00000605469 484 ntBASIC2.38□□□□□ -2.03
DDX39AO00148 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.38□□□□□ -2.03
DDX39AO00148 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
DDX39AO00148 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.37□□□□□ -2.03
DDX39AO00148 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.37□□□□□ -2.03
DDX39AO00148 Y_RNA.22-201ENST00000362492 102 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 RNU6-1010P-201ENST00000362757 107 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 SNORA6-201ENST00000384033 151 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 UBE2V1P10-201ENST00000414685 269 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 snoU13.26-201ENST00000459452 105 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 AC109486.1-201ENST00000486833 374 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.37□□□□□ -2.03
DDX39AO00148 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.37□□□□□ -2.03
DDX39AO00148 AP000873.5-201ENST00000533906 236 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.37□□□□□ -2.03
DDX39AO00148 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.37□□□□□ -2.03
DDX39AO00148 MTCYBP33-201ENST00000575007 1130 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 MIR548AB-201ENST00000584917 84 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 RPL30P11-203ENST00000598995 310 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 AC091304.9-201ENST00000612091 226 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 Y_RNA.783-201ENST00000613546 102 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 AC122133.1-201ENST00000613964 233 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 MIR6715A-201ENST00000615929 79 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 AC108479.2-201ENST00000617314 601 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 AC019226.2-201ENST00000625973 424 ntBASIC2.37□□□□□ -2.03
DDX39AO00148 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.37□□□□□ -2.03
DDX39AO00148 MIRLET7G-201ENST00000362280 84 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 RNU6-942P-201ENST00000363002 107 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 RNU6-179P-201ENST00000363350 107 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 RNU6-487P-201ENST00000365430 104 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.36□□□□□ -2.03
DDX39AO00148 GSTA9P-201ENST00000406231 611 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 AL355497.1-201ENST00000406262 551 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX39AO00148 EDDM3CP-201ENST00000415977 425 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.36□□□□□ -2.03
DDX39AO00148 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX39AO00148 AC005005.2-201ENST00000420779 380 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX39AO00148 MTND6P13-201ENST00000443510 523 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX39AO00148 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX39AO00148 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.36□□□□□ -2.03
DDX39AO00148 AC006026.2-201ENST00000457376 180 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 RAP1BP2-201ENST00000478270 544 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX39AO00148 RNU6-759P-201ENST00000516740 103 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX39AO00148 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX39AO00148 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX39AO00148 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX39AO00148 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX39AO00148 AC005771.1-201ENST00000585581 349 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX39AO00148 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX39AO00148 AL360219.1-201ENST00000610230 366 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 AL133173.2-201ENST00000614270 90 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 AC131280.1-202ENST00000624067 4211 ntBASIC2.36□□□□□ -2.03
DDX39AO00148 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
DDX39AO00148 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX39AO00148 OR4G2P-201ENST00000328113 903 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
DDX39AO00148 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
DDX39AO00148 RNU6-61P-201ENST00000365528 109 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 MIR578-201ENST00000384828 96 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 MIR561-201ENST00000385216 97 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 RNU6-1140P-201ENST00000410517 106 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms