Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LRRC37A5P-203ENST00000580181 585 ntBASIC2.34□□□□□ -2.03
SRRM4A7MD48 SRGNP1-201ENST00000603392 451 ntBASIC2.34□□□□□ -2.03
SRRM4A7MD48 AL357078.3-201ENST00000607528 618 ntBASIC2.34□□□□□ -2.03
SRRM4A7MD48 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SRRM4A7MD48 AC002553.4-201ENST00000616896 331 ntBASIC2.34□□□□□ -2.03
SRRM4A7MD48 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.34□□□□□ -2.03
SRRM4A7MD48 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.34□□□□□ -2.03
SRRM4A7MD48 AC138627.2-201ENST00000624202 601 ntBASIC2.34□□□□□ -2.03
SRRM4A7MD48 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.34□□□□□ -2.03
SRRM4A7MD48 MIR1321-201ENST00000637766 79 ntBASIC2.34□□□□□ -2.03
SRRM4A7MD48 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.34□□□□□ -2.03
SRRM4A7MD48 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SRRM4A7MD48 AL109809.4-201ENST00000603520 2185 ntBASIC2.34□□□□□ -2.04
SRRM4A7MD48 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SRRM4A7MD48 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 RPL9P7-201ENST00000330965 580 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 Y_RNA.255-201ENST00000364581 97 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 Y_RNA.295-201ENST00000364918 102 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 RNU6-715P-201ENST00000365204 103 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 RNU6-487P-201ENST00000365430 104 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 MIR181A2-201ENST00000384863 110 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AL590004.2-201ENST00000404787 371 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 RNA5SP492-201ENST00000411330 114 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 AL139413.1-201ENST00000421309 217 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 FABP5P14-201ENST00000437273 393 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AL671855.1-201ENST00000446875 1203 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 RPL23AP11-201ENST00000475260 469 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC018437.1-201ENST00000492214 406 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 SCARNA17.1-201ENST00000516211 143 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 SCARNA17.2-201ENST00000516334 143 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 RN7SKP219-201ENST00000516825 296 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC104383.1-201ENST00000530297 370 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC007536.1-201ENST00000533382 349 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 CR383656.8-201ENST00000549046 145 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC009163.5-201ENST00000575421 637 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC078899.3-201ENST00000599065 212 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC008121.1-201ENST00000603244 268 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC007621.1-201ENST00000604544 437 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC093788.1-201ENST00000609356 927 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC090115.4-201ENST00000609970 188 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 SCARNA17.4-201ENST00000614296 143 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 DUXAP9-208ENST00000622815 614 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC091953.5-201ENST00000622919 233 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 AC022418.1-201ENST00000624118 445 ntBASIC2.33□□□□□ -2.04
SRRM4A7MD48 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.33□□□□□ -2.04
SRRM4A7MD48 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SRRM4A7MD48 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SRRM4A7MD48 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SRRM4A7MD48 RNU6-858P-201ENST00000362436 107 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 RNU6-461P-201ENST00000364195 107 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 Y_RNA.399-201ENST00000383955 105 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 Y_RNA.573-201ENST00000384763 105 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SRRM4A7MD48 FGF7P8-201ENST00000402994 292 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 SNORD88.1-201ENST00000408684 91 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 AL592148.1-201ENST00000413568 445 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 AL121601.2-201ENST00000438019 707 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 RPL7P54-201ENST00000438336 674 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 MTCO3P18-201ENST00000440206 761 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 GSTA11P-201ENST00000452866 669 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC080013.2-201ENST00000460866 323 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 MRPL42P6-201ENST00000486397 371 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC008549.1-201ENST00000512900 643 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 RNU6-1281P-201ENST00000516223 105 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 RN7SKP40-201ENST00000517211 242 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC069113.1-201ENST00000517763 267 ntBASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.32□□□□□ -2.04
SRRM4A7MD48 OR1M4P-201ENST00000589199 287 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms