Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RN7SKP284-201ENST00000411002 343 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 AC006366.1-201ENST00000422002 759 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 AL008629.1-201ENST00000438615 184 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 AC245102.2-201ENST00000448956 180 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 NDUFB1P2-201ENST00000449477 176 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 HMGB1P30-201ENST00000492455 606 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 RPS29P21-201ENST00000496272 170 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 RNU2-10P-201ENST00000516375 211 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 RN7SKP256-201ENST00000517201 314 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 DUXAP5-201ENST00000529668 529 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 CLIC4P2-201ENST00000601934 717 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 AL158050.2-201ENST00000605336 568 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 AC013244.3-201ENST00000605614 388 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 RNU4-5P-201ENST00000607255 135 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 AL157392.4-201ENST00000609756 345 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 AL132822.1-201ENST00000617063 513 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 MIR219B-201ENST00000637023 88 ntBASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.41□□□□□ -2.18
RBFOX3A6NFN3 RNU6-157P-201ENST00000383957 107 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 RNU6-72P-201ENST00000384285 79 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 SNORA67.3-201ENST00000384366 140 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 MIR122-201ENST00000385044 85 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AL355143.1-201ENST00000407101 841 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 RNU2-32P-201ENST00000411193 191 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 UBE2V1P10-201ENST00000414685 269 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 USP9YP18-201ENST00000425912 695 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AL627311.1-201ENST00000431514 115 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 HSPE1P21-201ENST00000438283 308 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AC104058.1-201ENST00000448028 297 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AC012308.1-201ENST00000451232 178 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 USP9YP25-201ENST00000457708 443 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 snoU13.14-201ENST00000459372 104 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AL121594.1-201ENST00000475906 575 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AC117532.1-201ENST00000514638 323 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AP003392.2-201ENST00000527269 208 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AP003122.4-201ENST00000530980 758 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 GNAI2P1-201ENST00000541815 315 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AC018630.3-201ENST00000542637 96 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 HSBP1P1-201ENST00000555205 166 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 MTCYBP33-201ENST00000575007 1130 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AL139022.2-201ENST00000606934 443 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AC103810.8-201ENST00000607347 118 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AL355816.2-201ENST00000610049 647 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AC021755.4-201ENST00000616620 456 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 AC103706.2-201ENST00000638080 240 ntBASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RBFOX3A6NFN3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 MTND4P16-201ENST00000466108 1367 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 RNU6-655P-201ENST00000362858 107 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 RNU4-42P-201ENST00000364738 142 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 RNU6-546P-201ENST00000383991 107 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 SNORD14D-201ENST00000384390 87 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 MIR1262-201ENST00000408276 93 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 AC009310.1-201ENST00000414414 451 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 MTCO2P21-201ENST00000419780 677 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 UBE2V1P4-201ENST00000425374 344 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 MTND1P12-201ENST00000455231 147 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 AP001025.1-201ENST00000486139 332 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 AC007182.2-201ENST00000489251 402 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 YWHAEP4-201ENST00000505390 198 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 AC112206.4-201ENST00000515142 405 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 Y_RNA.689-201ENST00000516589 107 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 HSPE1P18-201ENST00000517602 280 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 AC107934.1-201ENST00000522215 217 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 AC011979.2-201ENST00000527568 352 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 CBX3P4-201ENST00000538909 354 ntBASIC1.39□□□□□ -2.19
RBFOX3A6NFN3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms