Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.53□□□□□ -2
TRIM49BA6NDI0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.53□□□□□ -2
TRIM49BA6NDI0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.53□□□□□ -2
TRIM49BA6NDI0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.53□□□□□ -2
TRIM49BA6NDI0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.53□□□□□ -2
TRIM49BA6NDI0 AC093788.1-201ENST00000609356 927 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRIM49BA6NDI0 AC130324.3-201ENST00000614165 542 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 MIR6766-201ENST00000622641 72 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.53□□□□□ -2
TRIM49BA6NDI0 AC004944.1-201ENST00000517807 3059 ntBASIC2.53□□□□□ -2.01
TRIM49BA6NDI0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 RNU6-778P-201ENST00000363269 103 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 SNORA38-201ENST00000363946 132 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 RNU6-483P-201ENST00000384088 108 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 RNU6-1103P-201ENST00000384150 107 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 RNU6-1158P-201ENST00000391167 107 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 FCF1P9-201ENST00000412546 282 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 MTATP6P18-201ENST00000417994 673 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 MTCYBP8-201ENST00000422855 651 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AL139415.2-201ENST00000431968 163 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AL606489.2-201ENST00000433886 234 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 GPR143P-201ENST00000434155 205 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 UBE2V1P8-201ENST00000437166 265 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AC003071.1-201ENST00000451219 789 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AC233279.1-201ENST00000455300 423 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 MTCO2P29-201ENST00000465212 189 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 RN7SL636P-201ENST00000497504 294 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AC092436.1-201ENST00000506450 503 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 MTCO3P9-201ENST00000506989 781 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AP000889.2-201ENST00000532684 490 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AC023824.2-201ENST00000566185 400 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 MTATP6P3-201ENST00000581686 676 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AC098826.3-201ENST00000603823 466 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AC013412.1-201ENST00000610687 192 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TRIM49BA6NDI0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AC080128.1-201ENST00000474389 1917 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 Y_RNA.6-201ENST00000362350 114 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 Y_RNA.38-201ENST00000362617 102 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 RNU6-1284P-201ENST00000363701 100 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 RNU6-1283P-201ENST00000365314 105 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 RNU6-946P-201ENST00000383878 107 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AL139095.1-201ENST00000404326 391 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AL590002.1-201ENST00000406554 418 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AL596276.1-201ENST00000434465 418 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 RPL7P54-201ENST00000438336 674 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 HMGB3P12-201ENST00000438745 556 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AL118520.1-201ENST00000450770 291 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 RNU7-26P-201ENST00000458980 63 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AC090096.1-201ENST00000489168 390 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 RNU6-1092P-201ENST00000516955 87 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AP001893.2-201ENST00000526949 202 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AC009163.5-201ENST00000575421 637 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 AL161798.1-201ENST00000604630 131 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 DUSP12P1-201ENST00000612874 516 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 U2.21-201ENST00000637295 81 ntBASIC2.51□□□□□ -2.01
TRIM49BA6NDI0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 ADAM3A-203ENST00000461344 2157 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC005336.3-201ENST00000623833 2679 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 HSPE1P11-201ENST00000339579 310 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 RNU6-61P-201ENST00000365528 109 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 XGY1-201ENST00000381172 446 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 RNU6-443P-201ENST00000384780 107 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AL445529.1-201ENST00000398713 389 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms