Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 AL139098.1-201ENST00000407291 389 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 NDUFA5P10-201ENST00000432147 357 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.32□□□□□ -2.36
CNOT1A5YKK6 RNA5SP112-201ENST00000515937 99 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.32□□□□□ -2.36
CNOT1A5YKK6 AC005832.3-201ENST00000537929 631 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 AC105224.1-201ENST00000587055 421 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 AC009233.1-201ENST00000616477 371 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.32□□□□□ -2.36
CNOT1A5YKK6 AC007792.1-201ENST00000623023 402 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
CNOT1A5YKK6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
CNOT1A5YKK6 AC009518.2-201ENST00000418056 731 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.32□□□□□ -2.36
CNOT1A5YKK6 KATNBL1P6-201ENST00000453433 915 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 MTND1P16-201ENST00000465177 898 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.32□□□□□ -2.36
CNOT1A5YKK6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.32□□□□□ -2.36
CNOT1A5YKK6 SMURF2P1-201ENST00000514992 481 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 OR5AK1P-201ENST00000524837 922 ntBASIC0.32□□□□□ -2.36
CNOT1A5YKK6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.32□□□□□ -2.36
CNOT1A5YKK6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.31□□□□□ -2.36
CNOT1A5YKK6 AL049641.1-201ENST00000441055 1948 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CNOT1A5YKK6 RNU6-730P-201ENST00000383954 104 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 RNU2-36P-201ENST00000410361 191 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 RNU2-49P-201ENST00000410666 184 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.31□□□□□ -2.36
CNOT1A5YKK6 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.31□□□□□ -2.36
CNOT1A5YKK6 PDCL2P1-201ENST00000419302 352 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 RPL31P53-201ENST00000457065 348 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.31□□□□□ -2.36
CNOT1A5YKK6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.31□□□□□ -2.36
CNOT1A5YKK6 HMGB1P36-201ENST00000487709 576 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 SNORA31.22-201ENST00000517204 135 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 MTCYBP22-201ENST00000603788 447 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 ZNF680P1-201ENST00000436625 1469 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 MIR1267-201ENST00000408723 78 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 AC119618.1-201ENST00000434191 222 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 AL157398.1-201ENST00000452981 186 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 AC013267.1-201ENST00000458227 267 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 RPL23AP54-201ENST00000495129 419 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.31□□□□□ -2.36
CNOT1A5YKK6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.31□□□□□ -2.36
CNOT1A5YKK6 MIR5739-201ENST00000619803 80 ntBASIC0.31□□□□□ -2.36
CNOT1A5YKK6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CNOT1A5YKK6 Y_RNA.288-201ENST00000364854 92 ntBASIC0.3□□□□□ -2.36
CNOT1A5YKK6 AC016717.1-201ENST00000448918 286 ntBASIC0.3□□□□□ -2.36
CNOT1A5YKK6 PSMC1P5-201ENST00000512850 177 ntBASIC0.3□□□□□ -2.36
CNOT1A5YKK6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.3□□□□□ -2.36
CNOT1A5YKK6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CNOT1A5YKK6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.3□□□□□ -2.36
CNOT1A5YKK6 AC091965.5-201ENST00000624785 342 ntBASIC0.3□□□□□ -2.36
CNOT1A5YKK6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CNOT1A5YKK6 RNU6-1222P-201ENST00000384615 107 ntBASIC0.3□□□□□ -2.36
CNOT1A5YKK6 MIR561-201ENST00000385216 97 ntBASIC0.3□□□□□ -2.36
CNOT1A5YKK6 RPL37P21-201ENST00000435890 276 ntBASIC0.3□□□□□ -2.36
CNOT1A5YKK6 MTND4P6-201ENST00000438297 472 ntBASIC0.3□□□□□ -2.36
CNOT1A5YKK6 AC145146.1-201ENST00000496370 254 ntBASIC0.3□□□□□ -2.36
CNOT1A5YKK6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.3□□□□□ -2.36
CNOT1A5YKK6 MIR3937-201ENST00000580135 106 ntBASIC0.3□□□□□ -2.36
CNOT1A5YKK6 AC010900.2-201ENST00000604508 210 ntBASIC0.3□□□□□ -2.36
CNOT1A5YKK6 AL137246.1-201ENST00000607072 977 ntBASIC0.3□□□□□ -2.36
CNOT1A5YKK6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
CNOT1A5YKK6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CNOT1A5YKK6 MIR506-201ENST00000384998 124 ntBASIC0.29□□□□□ -2.36
CNOT1A5YKK6 AC078974.1-201ENST00000411597 223 ntBASIC0.29□□□□□ -2.36
CNOT1A5YKK6 NDUFB4P7-201ENST00000423198 363 ntBASIC0.29□□□□□ -2.36
CNOT1A5YKK6 RPS29P8-201ENST00000445109 171 ntBASIC0.29□□□□□ -2.36
CNOT1A5YKK6 SNORD124-201ENST00000459577 104 ntBASIC0.29□□□□□ -2.36
CNOT1A5YKK6 DEFB108D-201ENST00000527787 222 ntBASIC0.29□□□□□ -2.36
CNOT1A5YKK6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.29□□□□□ -2.36
CNOT1A5YKK6 MIR4667-201ENST00000578933 66 ntBASIC0.29□□□□□ -2.36
CNOT1A5YKK6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.29□□□□□ -2.36
CNOT1A5YKK6 SNORA25-201ENST00000384384 134 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.28□□□□□ -2.36
CNOT1A5YKK6 AL135790.2-201ENST00000437701 267 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 RPL30P7-201ENST00000479312 323 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.28□□□□□ -2.36
CNOT1A5YKK6 RNU5A-7P-201ENST00000515979 116 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 RNU6-27P-201ENST00000516146 107 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 AC105036.1-201ENST00000566222 271 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
CNOT1A5YKK6 RNU6-1226P-201ENST00000384317 107 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 RNU6-452P-201ENST00000384406 107 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 RNU6-1184P-201ENST00000384588 108 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 RNU2-7P-201ENST00000410794 178 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.28□□□□□ -2.36
CNOT1A5YKK6 Z82210.1-201ENST00000440037 231 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CNOT1A5YKK6 AC104629.2-201ENST00000468627 598 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 COX6CP6-201ENST00000490840 228 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.28□□□□□ -2.36
CNOT1A5YKK6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.28□□□□□ -2.36
CNOT1A5YKK6 AC087897.1-201ENST00000550134 156 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 ADAM3B-201ENST00000569937 840 ntBASIC0.28□□□□□ -2.36
CNOT1A5YKK6 SNORD118-201ENST00000363593 134 ntBASIC0.27□□□□□ -2.37
CNOT1A5YKK6 AC021739.1-201ENST00000559631 174 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms