Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 RNU6-637P-201ENST00000384050 107 ntBASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 SNORA70.7-201ENST00000384159 133 ntBASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 RNU1-139P-201ENST00000391307 165 ntBASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 AL139397.2-201ENST00000404529 772 ntBASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 PIGPP2-201ENST00000411569 458 ntBASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 AL445305.1-201ENST00000432577 575 ntBASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 AC091860.1-201ENST00000505723 432 ntBASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-581P-201ENST00000516214 105 ntBASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 AC073544.2-201ENST00000601155 540 ntBASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-91P-201ENST00000607774 107 ntBASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
TRAV17A0A0B4J275 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 NACAP2-201ENST00000318548 624 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-492P-201ENST00000363035 104 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 SNORD114-26-201ENST00000363543 72 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 MIR7-2-201ENST00000384970 110 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-754P-201ENST00000391166 107 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC234064.1-201ENST00000436312 247 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC092001.1-201ENST00000453012 261 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 FABP5P15-201ENST00000453566 214 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 PRELID3BP1-201ENST00000457142 540 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-775P-201ENST00000459318 96 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 RPL21P47-201ENST00000483696 477 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AL133373.1-201ENST00000497098 94 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC025465.3-201ENST00000510570 311 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 RNVU1-2-201ENST00000516326 135 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 RNU5B-3P-201ENST00000516601 115 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AP003122.4-201ENST00000530980 758 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 RAB11AP2-201ENST00000545905 639 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC133485.1-201ENST00000567176 124 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC138907.6-201ENST00000568401 126 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 ADAM3B-201ENST00000569937 840 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC090615.1-201ENST00000577519 154 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 CYP2C61P-201ENST00000604072 290 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AL139344.1-201ENST00000605228 195 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AL390208.1-201ENST00000605885 644 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AL355802.3-201ENST00000607571 545 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC017037.3-201ENST00000625016 472 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 AC132825.7-201ENST00000638744 335 ntBASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV17A0A0B4J275 Y_RNA.36-201ENST00000362602 112 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 MIR1302-8-201ENST00000408342 128 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 VN1R42P-201ENST00000424651 344 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 ISCA1P1-201ENST00000426679 387 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 USP9YP22-201ENST00000438971 294 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 RPS15AP9-201ENST00000439856 381 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 MTCYBP11-201ENST00000447254 1109 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 RPL39P6-201ENST00000448289 150 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 AC245102.2-201ENST00000448956 180 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 OFD1P3Y-201ENST00000453312 783 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 TPRKBP1-201ENST00000456243 481 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 AL441985.1-201ENST00000457727 251 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 RNU7-140P-201ENST00000459546 60 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 RPL39P28-201ENST00000465655 155 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 AC010409.1-201ENST00000487382 476 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 PTP4A1P4-201ENST00000512479 322 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-351P-201ENST00000516097 100 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 ACA59.2-201ENST00000517061 156 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
TRAV17A0A0B4J275 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-658P-201ENST00000384606 106 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-1105P-201ENST00000384774 107 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 RN7SKP61-201ENST00000410642 295 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AL022400.1-201ENST00000423946 935 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AC139712.2-201ENST00000424302 339 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AC008267.5-201ENST00000424928 265 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AC007000.2-201ENST00000442564 487 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 SNORA31.17-201ENST00000516953 127 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AP000763.2-201ENST00000540641 163 ntBASIC0.7□□□□□ -2.3
TRAV17A0A0B4J275 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms