Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 AC092593.1-201ENST00000515413 1815 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 AL672167.1-203ENST00000641299 2975 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 USP8P1-201ENST00000494673 3183 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 ADAM3A-203ENST00000461344 2157 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 AC126755.2-208ENST00000327792 462 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 AC138969.1-213ENST00000331436 462 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-81P-201ENST00000365608 104 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 Y_RNA.398-201ENST00000383952 99 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 MIR320B2-201ENST00000408479 138 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 RPL23AP27-201ENST00000415161 451 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 AC112498.1-201ENST00000444401 332 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 RPS27AP10-201ENST00000496103 208 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-1219P-201ENST00000516143 112 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 AC018448.1-201ENST00000552843 316 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 AC136624.4-201ENST00000573044 370 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 RN7SL753P-201ENST00000581238 290 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 AC005255.1-201ENST00000593748 216 ntBASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA11Q9Y5H2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 MAPK10-263ENST00000641052 4307 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 AC139713.2-215ENST00000641428 5037 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 RN7SKP280-201ENST00000364196 304 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 RNA5SP167-201ENST00000365461 116 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 Y_RNA.441-201ENST00000384123 112 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 MIR1178-201ENST00000408396 91 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-1135P-201ENST00000411083 103 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 HSPE1P12-201ENST00000412576 301 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 AC009237.10-201ENST00000414112 510 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 OOSP1P1-201ENST00000423265 274 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 HMGN2P10-201ENST00000448085 265 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-581P-201ENST00000516214 105 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 AC115990.1-201ENST00000526957 301 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 MIR5692C2-201ENST00000577959 77 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 MIR4308-201ENST00000580634 81 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 AL357075.2-201ENST00000614906 189 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 AL365265.1-201ENST00000621045 234 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 MTND1P7-201ENST00000632801 297 ntBASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA11Q9Y5H2 AC099654.7-201ENST00000635788 2127 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 INTS6P1-201ENST00000504674 2530 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 RN7SKP104-201ENST00000362605 328 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU4-56P-201ENST00000364700 142 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-487P-201ENST00000365430 104 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-245P-201ENST00000384020 107 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 SNORA26.3-201ENST00000391119 136 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 AL160275.2-201ENST00000412010 394 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 BX510359.2-201ENST00000417920 305 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 BX510359.3-201ENST00000422168 306 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 AL732292.1-201ENST00000426692 226 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 RPL7AP6-201ENST00000477943 801 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU1-6P-201ENST00000516290 144 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 MTND6P33-201ENST00000571794 183 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 AC022726.1-201ENST00000587475 207 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 AL356575.1-201ENST00000603008 283 ntBASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA11Q9Y5H2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms