Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 RNU6-586P-201ENST00000517265 104 ntBASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 DEFB131D-201ENST00000526803 184 ntBASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 AC087897.1-201ENST00000550134 156 ntBASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 CLIC4P2-201ENST00000601934 717 ntBASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 AL645939.4-201ENST00000604495 135 ntBASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 AL163152.1-201ENST00000642001 374 ntBASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 RBBP8P1-201ENST00000449447 1844 ntBASIC1.09□□□□□ -2.23
ERGIC3Q9Y282 AP000560.1-201ENST00000624150 1937 ntBASIC1.09□□□□□ -2.24
ERGIC3Q9Y282 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 ZNF680P1-201ENST00000436625 1469 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 TEX21P-201ENST00000447107 1476 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 AL589826.1-201ENST00000340697 249 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 RNA5SP99-201ENST00000364020 114 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 RNU6-898P-201ENST00000365627 104 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 MIR597-201ENST00000384968 97 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 MIR518D-201ENST00000385014 87 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 RNA5SP213-201ENST00000391031 106 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 MTND4P15-201ENST00000437913 1033 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 ELOCP30-201ENST00000447108 299 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 RPF2P2-201ENST00000504693 896 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 RNA5SP458-201ENST00000516188 119 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 DEFB130C-202ENST00000530001 230 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 RPS3AP4-201ENST00000555161 764 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 AC136619.2-201ENST00000563361 631 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 MIR4782-201ENST00000577987 79 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 AC060771.1-201ENST00000582031 164 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 AC010900.2-201ENST00000604508 210 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 AC091965.5-201ENST00000624785 342 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 AC099654.9-201ENST00000637055 678 ntBASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.08□□□□□ -2.24
ERGIC3Q9Y282 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 CBX3P1-201ENST00000325243 554 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 RNU6-661P-201ENST00000362409 107 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 RNU5B-4P-201ENST00000363508 111 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 SNORA7.1-201ENST00000363750 139 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 SNORD14B-201ENST00000364533 90 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 SNORA40.6-201ENST00000391153 128 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 MTCO1P56-201ENST00000401674 224 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AC245517.4-201ENST00000448601 281 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 PRELID3BP1-201ENST00000457142 540 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 SNORD97-201ENST00000459187 142 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AC004223.1-201ENST00000479840 271 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AC024589.1-201ENST00000512207 263 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AC009902.1-201ENST00000519351 183 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AC021451.1-201ENST00000523498 1129 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AC005832.3-201ENST00000537929 631 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 DNAJC19P9-201ENST00000555084 351 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 MIR4303-201ENST00000581299 66 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AP000942.3-201ENST00000603702 160 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AP000676.3-201ENST00000623299 569 ntBASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
ERGIC3Q9Y282 RNU6-1164P-201ENST00000364428 107 ntBASIC1.06□□□□□ -2.24
ERGIC3Q9Y282 snoZ40.1-201ENST00000364540 72 ntBASIC1.06□□□□□ -2.24
ERGIC3Q9Y282 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
ERGIC3Q9Y282 RNU2-36P-201ENST00000410361 191 ntBASIC1.06□□□□□ -2.24
ERGIC3Q9Y282 TIMM9P2-201ENST00000419324 266 ntBASIC1.06□□□□□ -2.24
ERGIC3Q9Y282 AC108667.1-201ENST00000428618 249 ntBASIC1.06□□□□□ -2.24
ERGIC3Q9Y282 MTCO2P20-201ENST00000437339 673 ntBASIC1.06□□□□□ -2.24
ERGIC3Q9Y282 AC005094.1-201ENST00000440420 368 ntBASIC1.06□□□□□ -2.24
ERGIC3Q9Y282 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.06□□□□□ -2.24
ERGIC3Q9Y282 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms