Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
NPC1L1Q9UHC9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.53□□□□□ -2
NPC1L1Q9UHC9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 NACAP2-201ENST00000318548 624 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 SNORD56.2-201ENST00000363242 71 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 RNU6-288P-201ENST00000363690 104 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 SMIM11P1-201ENST00000369586 178 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 SNORA17.3-201ENST00000391159 129 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 MIR1294-201ENST00000408503 142 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 USP9YP15-201ENST00000442391 422 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 AC098826.2-201ENST00000452011 651 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 AC093899.1-201ENST00000457984 376 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 AC010486.2-201ENST00000505572 483 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 RNU6-703P-201ENST00000516946 107 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 SCARNA11.3-201ENST00000517276 130 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 RNU1-104P-201ENST00000517280 175 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 DUXAP5-201ENST00000529668 529 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 ROCK1P1-201ENST00000573767 549 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 MIR3915-201ENST00000578518 97 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 AC007494.3-201ENST00000624660 743 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 TEX21P-201ENST00000447107 1476 ntBASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
NPC1L1Q9UHC9 AC010889.1-201ENST00000566193 2666 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 RNU6-190P-201ENST00000384154 102 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 RNU6-658P-201ENST00000384606 106 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 AL513475.1-201ENST00000406602 315 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 USP9YP6-201ENST00000413550 854 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 ELOCP4-201ENST00000420090 333 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 AL591704.1-201ENST00000432574 275 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 AL591212.2-201ENST00000433923 257 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 MIR3935-201ENST00000583472 104 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 MIR3616-201ENST00000584070 92 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 AC012065.4-201ENST00000602445 679 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 AP002360.4-201ENST00000606980 481 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 AC091931.1-201ENST00000623488 728 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 AL512643.1-201ENST00000635735 524 ntBASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
NPC1L1Q9UHC9 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 SNORA38-201ENST00000363946 132 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 RNU6-946P-201ENST00000383878 107 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 RPL23AP32-201ENST00000395315 459 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 AC019129.1-201ENST00000403786 261 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 AL589872.1-201ENST00000426602 288 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 AC003989.2-201ENST00000440224 169 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 BRK1P2-201ENST00000442875 223 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 HMGN2P10-201ENST00000448085 265 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 snoU109.1-201ENST00000459339 135 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 MTCO2P6-201ENST00000463134 685 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 AP003181.2-201ENST00000528941 181 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 MIR6840-201ENST00000611937 71 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 MIR7111-201ENST00000619751 72 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 AC025048.6-202ENST00000627667 438 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 AC010329.5-201ENST00000623497 2174 ntBASIC2.5□□□□□ -2.01
NPC1L1Q9UHC9 Y_RNA.169-201ENST00000363745 96 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 RNU6-1083P-201ENST00000384022 107 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 MTND2P18-201ENST00000419962 1030 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 RPS24P1-201ENST00000438550 371 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 TAF9P1-201ENST00000445421 515 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC003071.1-201ENST00000451219 789 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 TAF9P2-201ENST00000454958 515 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 RNU5F-8P-201ENST00000515941 111 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 GNAI2P1-201ENST00000541815 315 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC021739.1-201ENST00000559631 174 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 MIR4782-201ENST00000577987 79 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC024619.4-201ENST00000580924 316 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AL356280.1-201ENST00000603614 379 ntBASIC2.49□□□□□ -2.01
NPC1L1Q9UHC9 AC135507.1-201ENST00000607214 561 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms