Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.63□□□□□ -1.83
DDX56Q9NY93 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.63□□□□□ -1.83
DDX56Q9NY93 RN7SKP18-201ENST00000516005 275 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 SNORA70.18-201ENST00000516696 98 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 AC093331.1-201ENST00000521474 169 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.63□□□□□ -1.83
DDX56Q9NY93 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.63□□□□□ -1.83
DDX56Q9NY93 AC026371.1-201ENST00000551867 419 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.63□□□□□ -1.83
DDX56Q9NY93 AL022345.1-201ENST00000607292 135 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 MIR7851-201ENST00000610611 160 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 AL136221.1-201ENST00000621449 509 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 U4.6-201ENST00000621618 127 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX56Q9NY93 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX56Q9NY93 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX56Q9NY93 FAM35CP-201ENST00000554755 2470 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 SNORD56.1-201ENST00000362913 68 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 SNORD114-19-201ENST00000363072 75 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 RNU6-105P-201ENST00000363909 104 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 RNU6-867P-201ENST00000364956 107 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 RNU6-827P-201ENST00000365553 106 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 RNU6-1329P-201ENST00000365664 107 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX56Q9NY93 AL445529.1-201ENST00000398713 389 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 RN7SKP220-201ENST00000410611 288 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 VN1R36P-201ENST00000414936 291 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 AL117339.3-201ENST00000418733 162 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 DBIP2-201ENST00000419076 262 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX56Q9NY93 AC006539.3-201ENST00000454258 129 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 RPS4XP2-201ENST00000458402 793 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 AC021205.2-201ENST00000480069 347 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 AC068587.1-201ENST00000483613 781 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 RNU6-256P-201ENST00000516747 97 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 SNORA31.18-201ENST00000517043 134 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 AC107934.2-201ENST00000518653 310 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 COX6CP5-201ENST00000527162 228 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 AC087241.2-201ENST00000535801 324 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX56Q9NY93 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX56Q9NY93 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX56Q9NY93 RPS15AP11-201ENST00000594193 385 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 MIR7157-201ENST00000635801 60 ntBASIC3.62□□□□□ -1.83
DDX56Q9NY93 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
DDX56Q9NY93 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
DDX56Q9NY93 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
DDX56Q9NY93 AC017071.1-201ENST00000564407 2204 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 RNU6-486P-201ENST00000363116 107 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 Y_RNA.279-201ENST00000364763 95 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
DDX56Q9NY93 AC022028.1-201ENST00000412054 408 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX56Q9NY93 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX56Q9NY93 RNU7-66P-201ENST00000459469 62 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 AC010401.1-201ENST00000463867 348 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 CENPBD1P1-201ENST00000464061 469 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 HMGN1P12-201ENST00000499125 195 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX56Q9NY93 AC046134.1-201ENST00000514454 666 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 SNORA31.23-201ENST00000517219 133 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 NDUFB9P3-201ENST00000521269 501 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 AC107953.1-201ENST00000522216 297 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 CKS1BP7-201ENST00000522230 235 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 AP005597.4-201ENST00000526762 229 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX56Q9NY93 BNIP3P16-201ENST00000589779 534 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 FAM157A-202ENST00000615155 405 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 AC009248.2-201ENST00000619826 254 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX56Q9NY93 AL008636.1-201ENST00000625038 1018 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
DDX56Q9NY93 Z83843.1-201ENST00000604070 3685 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.61□□□□□ -1.83
DDX56Q9NY93 AL161912.2-201ENST00000565707 3007 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 AC026241.1-201ENST00000517873 2142 ntBASIC3.61□□□□□ -1.83
DDX56Q9NY93 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX56Q9NY93 CBX3P1-201ENST00000325243 554 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 RNU6-1252P-201ENST00000363054 104 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 RNU6-767P-201ENST00000384132 107 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.6□□□□□ -1.83
DDX56Q9NY93 AC017079.2-201ENST00000416102 485 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 CYCSP4-201ENST00000429682 331 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 Z98742.2-201ENST00000431564 187 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 IFNA20P-201ENST00000436840 528 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 AC098614.3-201ENST00000438957 440 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 MTND5P20-201ENST00000448677 143 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX56Q9NY93 RNU6-507P-201ENST00000516045 100 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 SNORA31.6-201ENST00000516241 130 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 RNU6-864P-201ENST00000516256 108 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX56Q9NY93 AP000889.2-201ENST00000532684 490 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.6□□□□□ -1.83
DDX56Q9NY93 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX56Q9NY93 AC005476.1-201ENST00000554427 397 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX56Q9NY93 AL121917.1-203ENST00000605534 577 ntBASIC3.6□□□□□ -1.83
DDX56Q9NY93 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms