Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC026333.2-201ENST00000542164 106 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 OR8R1P-201ENST00000543943 764 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AC005476.1-201ENST00000554427 397 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.59□□□□□ -1.83
MKS1Q9NXB0 CPDP1-201ENST00000579660 283 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 MIR5690-201ENST00000583739 73 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AC018462.2-201ENST00000605375 395 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AL133255.1-201ENST00000606374 441 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AC005046.1-201ENST00000608515 625 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AL133215.3-201ENST00000609801 448 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 MIR6716-201ENST00000613413 80 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 MIR6758-201ENST00000620653 63 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 AL160413.1-201ENST00000622780 310 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MKS1Q9NXB0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.59□□□□□ -1.83
MKS1Q9NXB0 MTND4P23-201ENST00000447723 1363 ntBASIC3.59□□□□□ -1.83
MKS1Q9NXB0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
MKS1Q9NXB0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
MKS1Q9NXB0 MFSD8-233ENST00000641482 4860 ntBASIC3.59□□□□□ -1.84
MKS1Q9NXB0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MKS1Q9NXB0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MKS1Q9NXB0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.58□□□□□ -1.84
MKS1Q9NXB0 RNU6-1188P-201ENST00000363795 107 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 RNU6-1317P-201ENST00000364582 104 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 RNU6-336P-201ENST00000364891 107 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 RNY4P36-201ENST00000391116 96 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 MTCYBP4-201ENST00000401524 249 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 RPS29P13-201ENST00000402041 169 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 SNORA3.3-201ENST00000408712 125 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 RNU6-1304P-201ENST00000411374 106 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.58□□□□□ -1.84
MKS1Q9NXB0 Z99755.1-201ENST00000414048 380 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 SYF2P2-201ENST00000417620 583 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.58□□□□□ -1.84
MKS1Q9NXB0 MTND1P14-201ENST00000427400 950 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 AP000907.1-201ENST00000428428 510 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 SAR1AP4-201ENST00000429225 591 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 AC018644.1-201ENST00000429934 551 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 AC097713.2-201ENST00000430199 356 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 AL161651.1-201ENST00000440882 223 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 RPS3AP46-201ENST00000448352 682 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 SNORD5.1-201ENST00000458800 75 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 RN7SL594P-201ENST00000470590 287 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.58□□□□□ -1.84
MKS1Q9NXB0 AC010186.2-204ENST00000537668 439 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 CR383656.8-201ENST00000549046 145 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.58□□□□□ -1.84
MKS1Q9NXB0 SRGNP1-201ENST00000603392 451 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 AC019176.2-201ENST00000611579 315 ntBASIC3.58□□□□□ -1.84
MKS1Q9NXB0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
MKS1Q9NXB0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MKS1Q9NXB0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MKS1Q9NXB0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.57□□□□□ -1.84
MKS1Q9NXB0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
MKS1Q9NXB0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 RNU6-105P-201ENST00000363909 104 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MKS1Q9NXB0 RNU6-790P-201ENST00000384479 105 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
MKS1Q9NXB0 RNU6-1050P-201ENST00000410388 107 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 RNU2-49P-201ENST00000410666 184 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 AC017079.2-201ENST00000416102 485 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 AF228730.4-201ENST00000421457 183 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 USP9YP30-201ENST00000430729 455 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.57□□□□□ -1.84
MKS1Q9NXB0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.57□□□□□ -1.84
MKS1Q9NXB0 RPL23AP49-201ENST00000492925 468 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 AC002456.2-201ENST00000509356 380 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 PTP4A1P4-201ENST00000512479 322 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.57□□□□□ -1.84
MKS1Q9NXB0 Y_RNA.708-201ENST00000516950 96 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 SNORD19.2-201ENST00000516978 73 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 CYCSP30-201ENST00000546447 172 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 MIR3939-201ENST00000582614 106 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 AC006077.1-201ENST00000604746 343 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 AP000654.2-201ENST00000605633 586 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 AL627309.6-201ENST00000606857 840 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 AC084781.2-201ENST00000615568 161 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 AC090617.7-201ENST00000623952 126 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 AC112484.5-201ENST00000624189 228 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.57□□□□□ -1.84
MKS1Q9NXB0 MIR6830-201ENST00000636015 70 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.57□□□□□ -1.84
MKS1Q9NXB0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.57□□□□□ -1.84
MKS1Q9NXB0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.57□□□□□ -1.84
MKS1Q9NXB0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 KPNA2P1-201ENST00000458289 1591 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 RNU6-858P-201ENST00000362436 107 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 RNU6-933P-201ENST00000384424 107 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 SNORD116-20-201ENST00000384529 92 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 Y_RNA.594-201ENST00000410373 140 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 AL591419.1-201ENST00000427423 339 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 DAP3P1-201ENST00000441522 278 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 AL357552.1-201ENST00000445254 415 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms