Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC104058.1-201ENST00000448028 297 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 snoU109.1-201ENST00000459339 135 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AL121594.1-201ENST00000475906 575 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC079804.2-201ENST00000490376 200 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC097462.2-201ENST00000504623 481 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC117522.1-201ENST00000509821 380 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 MRPS17P9-201ENST00000511924 393 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC091965.2-201ENST00000512324 613 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 SNORA70.24-201ENST00000517233 118 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC135279.1-201ENST00000543493 504 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 OR11H5P-201ENST00000554039 926 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC090897.2-201ENST00000581715 130 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 MIR3935-201ENST00000583472 104 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC105129.3-201ENST00000605455 485 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC022202.1-201ENST00000613515 211 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC098657.3-201ENST00000620434 263 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC009878.1-201ENST00000621819 340 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 DUXAP9-208ENST00000622815 614 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 AC009487.4-201ENST00000624969 3585 ntBASIC1.42□□□□□ -2.18
SND1-IT1Q9HBX3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 RNU6-39P-201ENST00000384344 107 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 MIR221-201ENST00000385135 110 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 CISD1P1-201ENST00000393907 327 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 CBX3P9-201ENST00000402326 552 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 RNU2-39P-201ENST00000410604 198 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 RNU2-8P-201ENST00000410727 190 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AL031779.1-201ENST00000415663 330 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 ELOCP4-201ENST00000420090 333 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AL139413.1-201ENST00000421309 217 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC096920.1-201ENST00000423991 241 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC025750.2-201ENST00000442609 450 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC068587.2-201ENST00000478386 781 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 RPS3AP14-201ENST00000483907 780 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AP001025.1-201ENST00000486139 332 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 RNU6-123P-201ENST00000516163 102 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 RNA5SP200-201ENST00000516360 103 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 RNU6-667P-201ENST00000517186 102 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 RANP3-201ENST00000530970 276 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC018630.3-201ENST00000542637 96 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC011458.1-201ENST00000604034 617 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC112191.3-201ENST00000604371 277 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AL670379.2-201ENST00000604983 252 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AL670379.4-201ENST00000605279 254 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AL158032.1-201ENST00000605401 106 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 MIR92B-201ENST00000607575 96 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 MIR7106-201ENST00000612419 65 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC004223.4-201ENST00000612426 332 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC108479.2-201ENST00000617314 601 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AC092192.1-201ENST00000633154 1018 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 FARSBP1-201ENST00000435808 1778 ntBASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SND1-IT1Q9HBX3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
SND1-IT1Q9HBX3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-611P-201ENST00000384276 104 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 SNORD116-20-201ENST00000384529 92 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-1274P-201ENST00000384557 107 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 MIR29B2-201ENST00000385055 81 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 RNA5SP465-201ENST00000391195 109 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 RPL23AP32-201ENST00000395315 459 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 MTCYBP36-201ENST00000404146 440 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 RAP1BP3-201ENST00000407180 549 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-1140P-201ENST00000410517 106 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 HMGN2P38-201ENST00000423806 265 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 USP9YP18-201ENST00000425912 695 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AL589872.1-201ENST00000426602 288 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AC245102.2-201ENST00000448956 180 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AL109933.2-201ENST00000452651 260 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 PMCHL2-203ENST00000457791 237 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AC006512.1-201ENST00000468816 291 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 RN7SL274P-201ENST00000492268 272 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AF131216.2-201ENST00000512316 564 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 Y_RNA.687-201ENST00000516558 91 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 SNORA31.23-201ENST00000517219 133 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms