Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 CASP1P1-201ENST00000526345 212 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
USP29Q9HBJ7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.36□□□□□ -1.87
USP29Q9HBJ7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.36□□□□□ -1.87
USP29Q9HBJ7 MIR5680-201ENST00000577577 84 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 AC002044.1-201ENST00000606707 158 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USP29Q9HBJ7 MIR7112-201ENST00000616126 65 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 SCARNA4.1-201ENST00000628597 123 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.36□□□□□ -1.87
USP29Q9HBJ7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 RNU6-266P-201ENST00000364225 107 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 RNU6-395P-201ENST00000365662 106 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.480-201ENST00000384364 102 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 SSXP4-201ENST00000451349 245 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.632-201ENST00000459189 102 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 SNORA59A-201ENST00000459326 152 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 RPL30P5-201ENST00000494923 336 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 RNU1-86P-201ENST00000516108 154 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 RNU1-107P-201ENST00000516617 154 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 AP005639.2-201ENST00000527592 928 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 MIR5004-201ENST00000579078 107 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 MIR4325-201ENST00000583049 90 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 AC107294.3-201ENST00000609211 526 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 RMST_4.1-201ENST00000616886 107 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 AL031601.2-202ENST00000622650 282 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 AC099654.10-201ENST00000640395 161 ntBASIC3.35□□□□□ -1.87
USP29Q9HBJ7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP29Q9HBJ7 AL359693.1-201ENST00000614959 2407 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP29Q9HBJ7 ZNF519P1-201ENST00000449011 1626 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.33-201ENST00000362591 102 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 SNORD3E-201ENST00000362899 217 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 RNA5SP383-201ENST00000362934 120 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.387-201ENST00000383918 102 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.460-201ENST00000384255 102 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 SNORA1.3-201ENST00000384676 136 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 MIR325-201ENST00000385260 98 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 MIR548F5-201ENST00000408421 86 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 RN7SKP158-201ENST00000410453 326 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 RNU6-1025P-201ENST00000410629 104 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 RNU4-47P-201ENST00000410876 114 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.34□□□□□ -1.87
USP29Q9HBJ7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.34□□□□□ -1.87
USP29Q9HBJ7 MTND1P17-201ENST00000448961 204 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 AC115115.1-201ENST00000449927 248 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 MTND5P5-201ENST00000503764 376 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 AC008526.1-201ENST00000509149 338 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.34□□□□□ -1.87
USP29Q9HBJ7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.34□□□□□ -1.87
USP29Q9HBJ7 MIR4276-201ENST00000584832 70 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 AC016727.1-205ENST00000605437 569 ntBASIC3.34□□□□□ -1.87
USP29Q9HBJ7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.34□□□□□ -1.87
USP29Q9HBJ7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
USP29Q9HBJ7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
USP29Q9HBJ7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
USP29Q9HBJ7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.33□□□□□ -1.88
USP29Q9HBJ7 AL049641.1-201ENST00000441055 1948 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 RNU6-384P-201ENST00000364900 104 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 Y_RNA.394-201ENST00000383942 103 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 Y_RNA.419-201ENST00000384041 102 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 RNU6-1179P-201ENST00000384667 107 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 SNORA48.2-201ENST00000390926 124 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 AL360182.1-201ENST00000397433 468 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USP29Q9HBJ7 AL592148.1-201ENST00000413568 445 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 TMEM167AP1-201ENST00000423409 219 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 RPL7P37-201ENST00000425095 738 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 SKA2P1-201ENST00000425592 390 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.33□□□□□ -1.88
USP29Q9HBJ7 RN7SL283P-201ENST00000489055 303 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 AC139453.3-201ENST00000493276 369 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.33□□□□□ -1.88
USP29Q9HBJ7 HMGN1P13-201ENST00000505795 138 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.33□□□□□ -1.88
USP29Q9HBJ7 Y_RNA.701-201ENST00000516812 110 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 RNA5SP291-201ENST00000517222 105 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.33□□□□□ -1.88
USP29Q9HBJ7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.33□□□□□ -1.88
USP29Q9HBJ7 MIR4474-201ENST00000579189 78 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.33□□□□□ -1.88
USP29Q9HBJ7 APOOP1-201ENST00000604695 592 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 AC007938.3-201ENST00000604965 623 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 AC073657.2-201ENST00000605661 303 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 MIR6076-201ENST00000617521 113 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 AC090574.1-201ENST00000623186 233 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms