Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RNF39Q9H2S5 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF39Q9H2S5 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 AL133270.1-201ENST00000402635 279 ntBASIC6.4□□□□□ -1.38
RNF39Q9H2S5 RN7SKP111-201ENST00000410349 271 ntBASIC6.4□□□□□ -1.38
RNF39Q9H2S5 AC099336.2-201ENST00000422457 254 ntBASIC6.4□□□□□ -1.38
RNF39Q9H2S5 AC099560.2-201ENST00000457554 255 ntBASIC6.4□□□□□ -1.38
RNF39Q9H2S5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 AC114811.1-201ENST00000507207 168 ntBASIC6.4□□□□□ -1.38
RNF39Q9H2S5 SNORA70.16-201ENST00000516390 95 ntBASIC6.4□□□□□ -1.38
RNF39Q9H2S5 SNORA70.20-201ENST00000516848 126 ntBASIC6.4□□□□□ -1.38
RNF39Q9H2S5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC6.4□□□□□ -1.38
RNF39Q9H2S5 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RNF39Q9H2S5 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RNF39Q9H2S5 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RNF39Q9H2S5 AL021877.2-201ENST00000624442 10684 ntBASIC6.4□□□□□ -1.39
RNF39Q9H2S5 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.4□□□□□ -1.39
RNF39Q9H2S5 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RNF39Q9H2S5 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 RNA5SP211-201ENST00000365516 117 ntBASIC6.39□□□□□ -1.39
RNF39Q9H2S5 Y_RNA.443-201ENST00000384135 111 ntBASIC6.39□□□□□ -1.39
RNF39Q9H2S5 MIR181B2-201ENST00000385004 89 ntBASIC6.39□□□□□ -1.39
RNF39Q9H2S5 AC087499.4-201ENST00000448505 178 ntBASIC6.39□□□□□ -1.39
RNF39Q9H2S5 RPS23P6-201ENST00000466136 431 ntBASIC6.39□□□□□ -1.39
RNF39Q9H2S5 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 AC021739.1-201ENST00000559631 174 ntBASIC6.39□□□□□ -1.39
RNF39Q9H2S5 MIR4796-201ENST00000580742 81 ntBASIC6.39□□□□□ -1.39
RNF39Q9H2S5 AC020891.4-201ENST00000605745 93 ntBASIC6.39□□□□□ -1.39
RNF39Q9H2S5 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF39Q9H2S5 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 AC097484.1-201ENST00000471148 389 ntBASIC6.38□□□□□ -1.39
RNF39Q9H2S5 RNU6-303P-201ENST00000517091 106 ntBASIC6.38□□□□□ -1.39
RNF39Q9H2S5 MIR132-201ENST00000591554 101 ntBASIC6.38□□□□□ -1.39
RNF39Q9H2S5 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF39Q9H2S5 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 MIR323A-201ENST00000362199 86 ntBASIC6.37□□□□□ -1.39
RNF39Q9H2S5 MIR126-201ENST00000362291 85 ntBASIC6.37□□□□□ -1.39
RNF39Q9H2S5 SNORA64.1-201ENST00000362600 132 ntBASIC6.37□□□□□ -1.39
RNF39Q9H2S5 RNA5SP235-201ENST00000365411 114 ntBASIC6.37□□□□□ -1.39
RNF39Q9H2S5 RN7SKP286-201ENST00000410894 299 ntBASIC6.37□□□□□ -1.39
RNF39Q9H2S5 AC006445.1-201ENST00000491925 405 ntBASIC6.37□□□□□ -1.39
RNF39Q9H2S5 TOMM20P2-201ENST00000540082 421 ntBASIC6.37□□□□□ -1.39
RNF39Q9H2S5 AC010329.1-201ENST00000593903 8328 ntBASIC6.37□□□□□ -1.39
RNF39Q9H2S5 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.37□□□□□ -1.39
RNF39Q9H2S5 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 AC011504.1-201ENST00000623331 4103 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms